RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 OR13H1Q8NG92 308 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 FAM172AQ8WUF8 416 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 TBC1D31Q96DN5 1066 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 AGPAT1Q99943 283 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 SELENOOQ9BVL4 669 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 TM6SF2Q9BZW4 377 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 OSBPL2Q9H1P3 480 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 NDFIP2Q9NV92 336 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 TMEM248Q9NWD8 314 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 ADAM22Q9P0K1 906 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 DNAI1Q9UI46 699 aa19.07■□□□□ 0.64
PNKP-213ENST00000599543 ZFR2Q9UPR6 939 aaKnown RBP19.07■□□□□ 0.64
PNKP-213ENST00000599543 SMG1Q96Q15 3661 aaKnown RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 LRIG2O94898 1065 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 GYPCP04921 128 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 CALB1P05937 261 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 L1CAMP32004 1257 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 HDAC4P56524 1084 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 CLDN6P56747 220 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 GSCP56915 257 aaPredicted RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 RPS21P63220 83 aaKnown RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 MAPK8IP2Q13387 824 aaPredicted RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 POLD3Q15054 466 aaPredicted RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 TMEM259Q4ZIN3 620 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 PTAR1Q7Z6K3 402 aaPredicted RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 NLRP14Q86W24 1093 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 CCDC185Q8N715 623 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 FAM174AQ8TBP5 190 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 ISG20Q96AZ6 181 aaKnown RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 NXPE2Q96DL1 559 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 MAGEH1Q9H213 219 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 KLHL11Q9NVR0 708 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 HECAQ9UBI9 543 aaPredicted RBP19.06■□□□□ 0.64
PNKP-213ENST00000599543 ACTL7AQ9Y615 435 aa19.06■□□□□ 0.64
PNKP-213ENST00000599543 A6NNZ2 444 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 FAM72CH0Y354 149 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 CBFA2T2O43439 604 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 SIGLEC6O43699 453 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 RAMP2O60895 175 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 PLEKP08567 350 aaPredicted RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 GPD1P21695 349 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 DGKAP23743 735 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 RFC1P35251 1148 aaPredicted RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 CLDN2P57739 230 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 PTP4A2Q12974 167 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 CLEC16AQ2KHT3 1053 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 COL28A1Q2UY09 1125 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 FAM72AQ5TYM5 149 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 FAM72DQ6L9T8 149 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 GCNT7Q6ZNI0 430 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 PARS2Q7L3T8 475 aaKnown RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 FAM72BQ86X60 149 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 ZNF354CQ86Y25 554 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 PHF13Q86YI8 300 aaPredicted RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 C3orf20Q8ND61 904 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 OR6K2Q8NGY2 324 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 CENPIQ92674 756 aaPredicted RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 ARHGEF2Q92974 986 aaKnown RBP19.05■□□□□ 0.64
PNKP-213ENST00000599543 NTAN1Q96AB6 310 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 FEM1CQ96JP0 617 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 SLC17A9Q9BYT1 436 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 NEU3Q9UQ49 428 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 FADS3Q9Y5Q0 445 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 IGSF10Q6WRI0 2623 aa19.05■□□□□ 0.64
PNKP-213ENST00000599543 ANKRD62A6NC57 917 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 TMCO5BA8MYB1 307 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 FFAR2O15552 330 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 CD160O95971 181 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 TPM3P06753 285 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 ACP1P24666 158 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 CASP14P31944 242 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 DAB2P98082 770 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 ZNF211Q13398 564 aaPredicted RBP19.04■□□□□ 0.64
PNKP-213ENST00000599543 PROX2Q3B8N5 592 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 Q6ZSR6 202 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 ZNF571Q7Z3V5 609 aaPredicted RBP19.04■□□□□ 0.64
PNKP-213ENST00000599543 ABI3BPQ7Z7G0 1075 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 ZSCAN30Q86W11 494 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 PLPP6Q8IY26 295 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 SLC22A18ASQ8N1D0 253 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 SLC25A45Q8N413 288 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 OR2AP1Q8NGE2 309 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 HNRNPLLQ8WVV9 542 aaKnown RBP19.04■□□□□ 0.64
PNKP-213ENST00000599543 LRIG1Q96JA1 1093 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 TRIM5Q9C035 493 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 HAUS4Q9H6D7 363 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 TAS2R14Q9NYV8 317 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 MYO6Q9UM54 1294 aa19.04■□□□□ 0.64
PNKP-213ENST00000599543 KRIT1O00522 736 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 TRIM38O00635 465 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 NEMP1O14524 444 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 AP1G1O43747 822 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 PAK4O96013 591 aaPredicted RBP19.03■□□□□ 0.64
PNKP-213ENST00000599543 GSRP00390 522 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 SNRPD1P62314 119 aaKnown RBP19.03■□□□□ 0.64
PNKP-213ENST00000599543 KLHL30Q0D2K2 578 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 TARDBPQ13148 414 aaKnown RBP eCLIP19.03■□□□□ 0.64
PNKP-213ENST00000599543 SGCGQ13326 291 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 ZNF805Q5CZA5 627 aa19.03■□□□□ 0.64
PNKP-213ENST00000599543 FIGNQ5HY92 759 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms