RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 NAALADL1Q9UQQ1 740 aa8.53□□□□□ -1.04
FARP1-220ENST00000596613 NCKAP1Q9Y2A7 1128 aa8.53□□□□□ -1.04
FARP1-220ENST00000596613 ST14Q9Y5Y6 855 aa8.53□□□□□ -1.04
FARP1-220ENST00000596613 COL4A2P08572 1712 aa8.53□□□□□ -1.04
FARP1-220ENST00000596613 PIEZO1Q92508 2521 aa8.53□□□□□ -1.04
FARP1-220ENST00000596613 ZFHX2Q9C0A1 2572 aaPredicted RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 MYO16Q9Y6X6 1858 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SYNJ2BP-COX16A0A087WUM0 186 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 BCLAF3A2AJT9 711 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 ANKRD62A6NC57 917 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 PRRT4C9JH25 899 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 E5RJQ4 531 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 DCLK1O15075 740 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 MSI1O43347 362 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 TRUB2O95900 331 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 DNTTP04053 509 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ASLP04424 464 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ITGAVP06756 1048 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SYPP08247 313 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 PABPC1P11940 636 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 P2RY2P41231 377 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 STAT1P42224 750 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 RNASE9P60153 205 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 SLC6A3Q01959 620 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 UBXN1Q04323 297 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 NME3Q13232 169 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 PDCLQ13371 301 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 KLHDC7AQ5VTJ3 777 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 LRRC31Q6UY01 552 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 CHST9Q7L1S5 443 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 CHSY1Q86X52 802 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ZNF677Q86XU0 584 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 IRF2BP1Q8IU81 584 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SYT12Q8IV01 421 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 PASD1Q8IV76 773 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 FAM71AQ8IYT1 594 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 LGI2Q8N0V4 545 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 HDDC3Q8N4P3 179 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ARHGEF39Q8N4T4 335 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 BVESQ8NE79 360 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 DQX1Q8TE96 717 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 RLN3Q8WXF3 142 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 RMDN1Q96DB5 314 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SIPA1Q96FS4 1042 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 GABRG3Q99928 467 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 NUP58Q9BVL2 599 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 LGR4Q9BXB1 951 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 NOL6Q9H6R4 1146 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 WDCPQ9H6R7 721 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ZDHHC4Q9NPG8 344 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 SAMSN1Q9NSI8 373 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 ABCB8Q9NUT2 735 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 POLR3BQ9NW08 1133 aaPredicted RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 DDIT4Q9NX09 232 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 TAB2Q9NYJ8 693 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 COX16Q9P0S2 106 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 GGA2Q9UJY4 613 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 STOML2Q9UJZ1 356 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.52□□□□□ -1.05
FARP1-220ENST00000596613 ATG2BQ96BY7 2078 aa8.52□□□□□ -1.05
FARP1-220ENST00000596613 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 A0A1W2PQU0 124 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 MEI4A8MW99 385 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 SLC30A4O14863 429 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 TRIM24O15164 1050 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 LSM8O95777 96 aaKnown RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 WNT11O96014 354 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CALCAP01258 141 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CFIP05156 583 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 DLDP09622 509 aaKnown RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 UCHL3P15374 230 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 FOSL1P15407 271 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CYP11B1P15538 503 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 GABRG2P18507 467 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 HOXD12P35452 270 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 RPL34P49207 117 aaKnown RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 ATXN1P54253 815 aaKnown RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 GFPT1Q06210 699 aaPredicted RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 SULT2A1Q06520 285 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CCDC15Q0P6D6 951 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 ZNF177Q13360 481 aaPredicted RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 SLC12A1Q13621 1099 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 ZNF234Q14588 700 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 GEN1Q17RS7 908 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 DUOXA1Q1HG43 343 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 ARL13BQ3SXY8 428 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 TTC31Q49AM3 519 aaPredicted RBP8.51□□□□□ -1.05
FARP1-220ENST00000596613 PIK3R6Q5UE93 754 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 PMS2CLQ68D20 193 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 MBLAC2Q68D91 279 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 RFWD3Q6PCD5 774 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 TRIM72Q6ZMU5 477 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 SLC47A2Q86VL8 602 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 ZNF227Q86WZ6 799 aa8.51□□□□□ -1.05
FARP1-220ENST00000596613 TMPRSS6Q8IU80 811 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms