RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 SERPINB12Q96P63 405 aa9.96□□□□□ -0.82
LIG3-216ENST00000593099 PPARGC1AQ9UBK2 798 aaKnown RBP9.96□□□□□ -0.82
LIG3-216ENST00000593099 TBX21Q9UL17 535 aa9.96□□□□□ -0.82
LIG3-216ENST00000593099 GRXCR1A8MXD5 290 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 RFPL2O75678 378 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CTGFP29279 349 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 RPL21P46778 160 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 IL10RBQ08334 325 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 HIC1Q14526 733 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 INSCQ1MX18 579 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ITPRIPL2Q3MIP1 535 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 OR2W6PQ8NHA6 318 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 TACO1Q9BSH4 297 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 CASS4Q9NQ75 786 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.95□□□□□ -0.82
LIG3-216ENST00000593099 LEFTY2O00292 366 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CACNB4O00305 520 aaPredicted RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 RPSAP08865 295 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 ITGB6P18564 788 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 FGFR3P22607 806 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ADRA1DP25100 572 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 STX3Q13277 289 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 LRRC14Q15048 493 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 C2orf27AQ580R0 203 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 FBXL22Q6P050 247 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ANGPTL8Q6UXH0 198 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 HMCESQ96FZ2 354 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 SGSM3Q96HU1 749 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 VIPAS39Q9H9C1 493 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CATSPERZQ9NTU4 200 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 PCDHGB4Q9UN71 923 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 A0A0U1RQJ8 604 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 SYCE1LA8MT33 242 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 QSOX1O00391 747 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 BUD23O43709 281 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 ATG13O75143 517 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 GLRA3O75311 464 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 RBP1P09455 135 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 KITP10721 976 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 MZF1P28698 734 aaPredicted RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 CDKN2BP42772 138 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ATXN1P54253 815 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 HADHBP55084 474 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 MLLT6P55198 1093 aaPredicted RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 ART3Q13508 389 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 HNRNPDQ14103 355 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 CES3Q6UWW8 571 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 OLFML1Q6UWY5 402 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 MARK2Q7KZI7 788 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 EFL1Q7Z2Z2 1120 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 PRPF39Q86UA1 669 aaKnown RBP9.95□□□□□ -0.82
LIG3-216ENST00000593099 TCEAL8Q8IYN2 117 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 OR14C36Q8NHC7 312 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CYP2S1Q96SQ9 504 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 PIGVQ9NUD9 493 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ZDHHC7Q9NXF8 308 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 SLC13A4Q9UKG4 626 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CHKBQ9Y259 395 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 ITGB1P05556 798 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CFHP08603 1231 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 GRK3P35626 688 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 AARSP49588 968 aaKnown RBP eCLIP9.95□□□□□ -0.82
LIG3-216ENST00000593099 SPDYAQ5MJ70 313 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 C1orf220Q5T0J3 134 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 MBLAC2Q68D91 279 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 LMO3Q8TAP4 145 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 CCDC126Q96EE4 140 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 PAFAH2Q99487 392 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 MYOCQ99972 504 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 TUBB6Q9BUF5 446 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 TNKS2Q9H2K2 1166 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 PCYOX1Q9UHG3 505 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 SLC24A2Q9UI40 661 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 STARD13Q9Y3M8 1113 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 DYRK1BQ9Y463 629 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 RAI2Q9Y5P3 530 aa9.95□□□□□ -0.82
LIG3-216ENST00000593099 PIRTP0C851 137 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 ETS1P14921 441 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 HSD17B3P37058 310 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 C21orf59P57076 290 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 DMPKQ09013 629 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 PRKAA1Q13131 559 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 ITGA9Q13797 1035 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 DMC1Q14565 340 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 NIPA2Q8N8Q9 360 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 C12orf50Q8NA57 414 aaPredicted RBP9.94□□□□□ -0.82
LIG3-216ENST00000593099 TSTD1Q8NFU3 115 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 ILVBLA1L0T0 632 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 MATN3O15232 486 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 NDST3O95803 873 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 CYP2A7P20853 494 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 CSKP41240 450 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 CLDN10P78369 228 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 DLG2Q15700 870 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 DPYSL2Q16555 572 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 AGBL2Q5U5Z8 902 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 WDR93Q6P2C0 686 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 POTEHQ6S545 545 aa9.94□□□□□ -0.82
LIG3-216ENST00000593099 AFTPHQ6ULP2 937 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms