RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
DDX39A-219ENST00000592927 LMLNQ96KR4 655 aa12.13□□□□□ -0.47
DDX39A-219ENST00000592927 ERP44Q9BS26 406 aa12.13□□□□□ -0.47
DDX39A-219ENST00000592927 FAM129AQ9BZQ8 928 aa12.13□□□□□ -0.47
DDX39A-219ENST00000592927 CIPCQ9C0C6 399 aa12.13□□□□□ -0.47
DDX39A-219ENST00000592927 ZNF212Q9UDV6 495 aa12.13□□□□□ -0.47
DDX39A-219ENST00000592927 LNP1A1A4G5 178 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 ILVBLA1L0T0 632 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PRRT4C9JH25 899 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 NDC80O14777 642 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 RAMP2O60895 175 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PRB1P04280 392 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 ATP5BP06576 529 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 H2AFXP16104 143 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 POLR2EP19388 210 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 AMPD1P23109 780 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 MZF1P28698 734 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SERPINB6P35237 376 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 KCNJ1P48048 391 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PLK1P53350 603 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SEC13P55735 322 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 EIF3EP60228 445 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 CREB5Q02930 508 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 GNA12Q03113 381 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SNX1Q13596 522 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PTK6Q13882 451 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 EIF4HQ15056 248 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PAFAH1B3Q15102 231 aaKnown RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 E2F5Q15329 346 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PPP1R7Q15435 360 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 UAP1L1Q3KQV9 507 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PLEKHG6Q3KR16 790 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 FUT11Q495W5 492 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 PITRM1Q5JRX3 1037 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 MBLAC2Q68D91 279 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 DUPD1Q68J44 220 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SYNPOQ8N3V7 929 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 CCDC89Q8N998 374 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 ATG4AQ8WYN0 398 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 EZH1Q92800 747 aaPredicted RBP12.12□□□□□ -0.47
DDX39A-219ENST00000592927 LRIG1Q96JA1 1093 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 CCDC114Q96M63 670 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 FEM1AQ9BSK4 669 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 SPON2Q9BUD6 331 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 EPB41L5Q9HCM4 733 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 TMEM9BQ9NQ34 198 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 NDFIP2Q9NV92 336 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 ELOVL2Q9NXB9 296 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 VPS28Q9UK41 221 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 DNPEPQ9ULA0 475 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 ZNF148Q9UQR1 794 aa12.12□□□□□ -0.47
DDX39A-219ENST00000592927 LAMA1P25391 3075 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 MYOFQ9NZM1 2061 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 A0A0D9SEW6 157 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 BCLAF3A2AJT9 711 aaKnown RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 CDX4O14627 284 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 DCLK1O15075 740 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 RNF40O75150 1001 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 RBP3P10745 1247 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 PECAM1P16284 738 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 ETFBP38117 255 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 VSNL1P62760 191 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 MRPS21P82921 87 aaKnown RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 SULT2A1Q06520 285 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 PLK5Q496M5 336 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 C2orf27AQ580R0 203 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 TMEM215Q68D42 235 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 NCBP2-AS2Q69YL0 99 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 GSTA5Q7RTV2 222 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 ADIPOR2Q86V24 386 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 CDKL3Q8IVW4 592 aaPredicted RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 APCDD1Q8J025 514 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 LZTR1Q8N653 840 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 ALLCQ8N6M5 410 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 OR52K2Q8NGK3 314 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 KCNV2Q8TDN2 545 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 BRD8Q9H0E9 1235 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 MAGEH1Q9H213 219 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 INTS6Q9UL03 887 aaKnown RBP12.11□□□□□ -0.47
DDX39A-219ENST00000592927 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 STARD13Q9Y3M8 1113 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 OR51B4Q9Y5P0 310 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 FREM2Q5SZK8 3169 aa12.11□□□□□ -0.47
DDX39A-219ENST00000592927 CCDC163A0A0D9SF12 145 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 FAM221BA6H8Z2 402 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ASLP04424 464 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
DDX39A-219ENST00000592927 TIE1P35590 1138 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 NUMBP49757 651 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 NDST2P52849 883 aa12.1□□□□□ -0.47
DDX39A-219ENST00000592927 ECT2LQ008S8 904 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms