RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 LEFTY1O75610 366 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CER1O95813 267 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PRNPP04156 253 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 WNT1P04628 370 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ZNF883P0CG24 379 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CTSKP43235 329 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PAPOLAP51003 745 aaKnown RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ZNF135P52742 658 aaPredicted RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 NDST2P52849 883 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CDH6P55285 790 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PPP2CBP62714 309 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PPP2CAP67775 309 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CNTN1Q12860 1018 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 DPYSQ14117 519 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 TEAD4Q15561 434 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 TRIP6Q15654 476 aaKnown RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CARD16Q5EG05 197 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ATXN7L2Q5T6C5 722 aaPredicted RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 DBX2Q6ZNG2 339 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 SLC35G2Q8TBE7 412 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 RFFLQ8WZ73 363 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 ARRDC3Q96B67 414 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CSPG4P5Q96PW8 444 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 HEPHQ9BQS7 1158 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 SLC39A8Q9C0K1 460 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PCDH18Q9HCL0 1135 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 TM7SF3Q9NS93 570 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 HECAQ9UBI9 543 aaPredicted RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 UBA2Q9UBT2 640 aaPredicted RBP14.16□□□□□ -0.14
CLIP3-205ENST00000592017 PCOLCE2Q9UKZ9 415 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 MFHAS1Q9Y4C4 1052 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CACNA1BQ00975 2339 aa14.16□□□□□ -0.14
CLIP3-205ENST00000592017 CEP192Q8TEP8 1941 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 IGF2RP11717 2491 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 A0A1W2PR77 199 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 H0Y8X5 98 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 J3KR12 359 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 KRIT1O00522 736 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 VILLO15195 856 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 HYAL3O43820 417 aaPredicted RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 AMPD1P23109 780 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 GKP32189 559 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 TAS2R40P59535 323 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 RHOAP61586 193 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 SNRPD1P62314 119 aaKnown RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 RACK1P63244 317 aaKnown RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 MMRN1Q13201 1228 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 HNRNPDQ14103 355 aaKnown RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 PRAMEF14Q5SWL7 426 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 AGBL4Q5VU57 503 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 TMCO3Q6UWJ1 677 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 POLNQ7Z5Q5 900 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 RHOT2Q8IXI1 618 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 SPC24Q8NBT2 197 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 TMIEQ8NEW7 156 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 OR2AP1Q8NGE2 309 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 SETD7Q8WTS6 366 aaKnown RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 ISG20Q96AZ6 181 aaKnown RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 PPP1R16AQ96I34 528 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 EXOC2Q96KP1 924 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 ANP32EQ9BTT0 268 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 SCNM1Q9BWG6 230 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 CALN1Q9BXU9 219 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 SP110Q9HB58 689 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 LCMT1Q9UIC8 334 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 PCDHGB2Q9Y5G2 931 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 WASF2Q9Y6W5 498 aa14.15□□□□□ -0.14
CLIP3-205ENST00000592017 KMT2BQ9UMN6 2715 aaPredicted RBP14.15□□□□□ -0.14
CLIP3-205ENST00000592017 AKAP13Q12802 2813 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 SPEGQ15772 3267 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ADAMTS9Q9P2N4 1935 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3DA0A087WVF3 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3IA0A087WXS9 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3EA0A087X179 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3KA0A087X1G2 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 CXorf51AA0A1B0GTR3 108 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3FA6NER0 549 aaPredicted RBP14.14□□□□□ -0.15
CLIP3-205ENST00000592017 SOWAHDA6NJG2 315 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3LB9A6J9 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 SLC7A4O43246 635 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 LATO43561 262 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 PLRG1O43660 514 aaKnown RBP14.14□□□□□ -0.15
CLIP3-205ENST00000592017 IGSF6O95976 241 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 GSRP00390 522 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 CD48P09326 243 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3HP0C7X1 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 MAN1A1P33908 653 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 CYLC1P35663 651 aaPredicted RBP14.14□□□□□ -0.15
CLIP3-205ENST00000592017 MAGEA1P43355 309 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 HCAR3P49019 387 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TAS2R38P59533 333 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 SPA17Q15506 151 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ZNF423Q2M1K9 1284 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ATP13A4Q4VNC1 1196 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3GQ6DHY5 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3CQ6IPX1 549 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ARHGAP36Q6ZRI8 547 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 ARHGAP12Q8IWW6 846 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TP53INP2Q8IXH6 220 aa14.14□□□□□ -0.15
CLIP3-205ENST00000592017 TBC1D3Q8IZP1 549 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms