RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SLC25A11Q02978 314 aaKnown RBP27.67■■■□□ 2.02
SMAD4-213ENST00000591914 SMTNL2Q2TAL5 461 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 MYLK3Q32MK0 819 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 NAPEPLDQ6IQ20 393 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 RYBPQ8N488 228 aaPredicted RBP27.67■■■□□ 2.02
SMAD4-213ENST00000591914 TEKT4Q8WW24 435 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 SLC39A8Q9C0K1 460 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 ZWILCHQ9H900 591 aa27.67■■■□□ 2.02
SMAD4-213ENST00000591914 TMEM131Q92545 1883 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 MYO1FO00160 1098 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 KRIT1O00522 736 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 PRAMEF11O60813 436 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 RNGTTO60942 597 aaKnown RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 RARAP10276 462 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 ADRB3P13945 408 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 GKP32189 559 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 ADKP55263 362 aaKnown RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 TSR1Q2NL82 804 aaKnown RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 SETMARQ53H47 684 aaPredicted RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 ATXN7L2Q5T6C5 722 aaPredicted RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 TXNRD3NBQ6F5E7 133 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 PARS2Q7L3T8 475 aaKnown RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 ARHGAP12Q8IWW6 846 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 NPWQ8N729 165 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 ZNF564Q8TBZ8 553 aaPredicted RBP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 SKA1Q96BD8 255 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 GDAP1L1Q96MZ0 367 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 PACSIN1Q9BY11 444 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 DEF6Q9H4E7 631 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 TM7SF3Q9NS93 570 aa27.66■■■□□ 2.02
SMAD4-213ENST00000591914 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.66■■■□□ 2.02
SMAD4-213ENST00000591914 PCNX2A6NKB5 2137 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 ARHGAP42A6NI28 874 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 H3BRJ5 948 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 J3KR12 359 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 PAPOLAP51003 745 aaKnown RBP27.65■■■□□ 2.02
SMAD4-213ENST00000591914 C21orf59P57076 290 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 RHOAP61586 193 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 TBX2Q13207 712 aaPredicted RBP27.65■■■□□ 2.02
SMAD4-213ENST00000591914 ZNF423Q2M1K9 1284 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 ZNF805Q5CZA5 627 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 POLNQ7Z5Q5 900 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 CTNNBL1Q8WYA6 563 aaPredicted RBP27.65■■■□□ 2.02
SMAD4-213ENST00000591914 HSPH1Q92598 858 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 CHP1Q99653 195 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 OSBPL1AQ9BXW6 950 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 UVRAGQ9P2Y5 699 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 LHX3Q9UBR4 397 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 UBA2Q9UBT2 640 aaPredicted RBP27.65■■■□□ 2.02
SMAD4-213ENST00000591914 MFHAS1Q9Y4C4 1052 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 PCDHGB2Q9Y5G2 931 aa27.65■■■□□ 2.02
SMAD4-213ENST00000591914 TP53BP1Q12888 1972 aaPredicted RBP27.64■■■□□ 2.02
SMAD4-213ENST00000591914 A0A1W2PQU0 124 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 SH3BP5O60239 455 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 IGSF6O95976 241 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 H2AFZP0C0S5 128 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 ARL4AP40617 200 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 CYTH1Q15438 398 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 ZNF284Q2VY69 593 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 FBXL19Q6PCT2 694 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 H2AFVQ71UI9 128 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 HORMAD1Q86X24 394 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 CNGA4Q8IV77 575 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 NAXDQ8IW45 347 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 NETO2Q8NC67 525 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 CTTNBP2NLQ9P2B4 639 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 FADS3Q9Y5Q0 445 aa27.64■■■□□ 2.02
SMAD4-213ENST00000591914 DOCK9Q9BZ29 2069 aa27.64■■■□□ 2.01
SMAD4-213ENST00000591914 C16orf96A6NNT2 1141 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 AP1G1O43747 822 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 AKR1B10O60218 316 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 PMLP29590 882 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 SLC45A4Q5BKX6 768 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 DBX2Q6ZNG2 339 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 LZTR1Q8N653 840 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 MFSD2AQ8NA29 543 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 CSPG4P5Q96PW8 444 aa27.63■■■□□ 2.01
SMAD4-213ENST00000591914 NHEJ1Q9H9Q4 299 aaPredicted RBP27.63■■■□□ 2.01
SMAD4-213ENST00000591914 ZFR2Q9UPR6 939 aaKnown RBP27.63■■■□□ 2.01
SMAD4-213ENST00000591914 PRAMEF26H0Y7S4 382 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 H0Y8X5 98 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 KCNK3O14649 394 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 DFNA5O60443 496 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 PCDH8O95206 1070 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 UGT2B4P06133 528 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 TMEM253P0C7T8 217 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 RAD51Q06609 339 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 HNRNPDQ14103 355 aaKnown RBP27.62■■■□□ 2.01
SMAD4-213ENST00000591914 TMEM259Q4ZIN3 620 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 GDPD4Q6W3E5 623 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 IQCHQ86VS3 1027 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 TSC1Q92574 1164 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 RAB7BQ96AH8 199 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 CCDC42Q96M95 316 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 CAMK1GQ96NX5 476 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 TRIM5Q9C035 493 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 PCDH18Q9HCL0 1135 aa27.62■■■□□ 2.01
SMAD4-213ENST00000591914 AKR1B15C9JRZ8 316 aaPredicted RBP27.61■■■□□ 2.01
SMAD4-213ENST00000591914 PROSCO94903 275 aa27.61■■■□□ 2.01
SMAD4-213ENST00000591914 TMEM145Q8NBT3 493 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms