RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 MYLK3Q32MK0 819 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ATP13A4Q4VNC1 1196 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ATXN7L2Q5T6C5 722 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ERN2Q76MJ5 926 aaKnown RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ERMP1Q7Z2K6 904 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 RHOT2Q8IXI1 618 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 CCDC170Q8IYT3 715 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 RYBPQ8N488 228 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 NETO2Q8NC67 525 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 OR6K2Q8NGY2 324 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 RFFLQ8WZ73 363 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 TSC1Q92574 1164 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 LRIG1Q96JA1 1093 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 PANX2Q96RD6 677 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 MFRPQ9BY79 579 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ZDHHC5Q9C0B5 715 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 EBF2Q9HAK2 575 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 PDFQ9HBH1 243 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 PREBQ9HCU5 417 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ETNK2Q9NVF9 386 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 UBA2Q9UBT2 640 aaPredicted RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 INTUQ9ULD6 942 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 TPX2Q9ULW0 747 aaKnown RBP9.34□□□□□ -0.91
DNMT1-223ENST00000591239 MFHAS1Q9Y4C4 1052 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 SPEGQ15772 3267 aa9.34□□□□□ -0.91
DNMT1-223ENST00000591239 ADAMTS9Q9P2N4 1935 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 A0A1B0GVT2 93 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 TMEM110-MUSTN1A8MSY1 372 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 PALMO75781 387 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 MTA2O94776 668 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 LCA5LO95447 670 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 IGSF6O95976 241 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 KRT7P08729 469 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 CD48P09326 243 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ADRB3P13945 408 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 MAT2AP31153 395 aaKnown RBP9.33□□□□□ -0.92
DNMT1-223ENST00000591239 GJC1P36383 396 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ARHGAP25P42331 645 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 GRIA4P48058 902 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ARSEP51690 589 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 NEK3P51956 506 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 TAS2R40P59535 323 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 RHOAP61586 193 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 PPP2CBP62714 309 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
DNMT1-223ENST00000591239 PPP2CAP67775 309 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 BNC1Q01954 994 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 RAD51Q06609 339 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 IL10RBQ08334 325 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 MMRN1Q13201 1228 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 TEAD4Q15561 434 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 UAP1L1Q3KQV9 507 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ZNF805Q5CZA5 627 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 NEK5Q6P3R8 708 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 FBXL19Q6PCT2 694 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ARHGAP36Q6ZRI8 547 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 TRIM69Q86WT6 500 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 TP53INP2Q8IXH6 220 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 MINDY1Q8N5J2 469 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 KCTD6Q8NC69 237 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 OR2I1PQ8NGU4 316 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 FAM71BQ8TC56 605 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 VOPP1Q96AW1 172 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 GDAP1L1Q96MZ0 367 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 CALN1Q9BXU9 219 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 OSBPL1AQ9BXW6 950 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 DNAAF2Q9NVR5 837 aaKnown RBP9.33□□□□□ -0.92
DNMT1-223ENST00000591239 RCOR3Q9P2K3 495 aaPredicted RBP9.33□□□□□ -0.92
DNMT1-223ENST00000591239 LHX3Q9UBR4 397 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 PCDH15Q96QU1 1955 aa9.33□□□□□ -0.92
DNMT1-223ENST00000591239 KNL1Q8NG31 2342 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 OPHN1O60890 802 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 GJB3O75712 270 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 PCDH8O95206 1070 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 UGT2B4P06133 528 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 FECHP22830 423 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 CD38P28907 300 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 SERPINB6P35237 376 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 CYLC1P35663 651 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 NUDT1P36639 197 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 MAGEA1P43355 309 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 RFTN1Q14699 578 aaPredicted RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 PDK2Q15119 407 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 TCEAL1Q15170 157 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 SPA17Q15506 151 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 IL27RAQ6UWB1 636 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 LAYNQ6UX15 382 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 GDPD4Q6W3E5 623 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 PARS2Q7L3T8 475 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 ADAT2Q7Z6V5 191 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 PRPF39Q86UA1 669 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 MAP7D3Q8IWC1 876 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 TSEN2Q8NCE0 465 aaKnown RBP9.32□□□□□ -0.92
DNMT1-223ENST00000591239 EXOC2Q96KP1 924 aa9.32□□□□□ -0.92
DNMT1-223ENST00000591239 SLC6A18Q96N87 628 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms