RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 OR2A12Q8NGT7 310 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 OR8D1Q8WZ84 308 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 SPON2Q9BUD6 331 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMAD4-211ENST00000590499 NUSAP1Q9BXS6 441 aaKnown RBP11.44□□□□□ -0.58
SMAD4-211ENST00000590499 THAP2Q9H0W7 228 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MAGEH1Q9H213 219 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 NEUROG2Q9H2A3 272 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
SMAD4-211ENST00000590499 FSCN3Q9NQT6 498 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 GPATCH2LQ9NWQ4 482 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 SUSD2Q9UGT4 822 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 DNAI1Q9UI46 699 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 SLCO1B1Q9Y6L6 691 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 DCDC2BA2VCK2 349 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 EIF3CLB5ME19 914 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 FGF10O15520 208 aaPredicted RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 RAMP2O60895 175 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 IL1BP01584 269 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 CFIP05156 583 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 CYP1A2P05177 515 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 IGHV4-34P06331 123 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 GOT1P17174 413 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 DESP17661 470 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ENGP17813 658 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 EPHB2P29323 1055 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 HTR7P34969 479 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 PCK1P35558 622 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 GALCP54803 685 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ADPRHP54922 357 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 SLC20A2Q08357 652 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 SFSWAPQ12872 951 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 CA9Q16790 459 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ACCSLQ4AC99 568 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ALKBH5Q6P6C2 394 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 SARM1Q6SZW1 724 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 DSG4Q86SJ6 1040 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 PSTKQ8IV42 348 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 RGL4Q8IZJ4 473 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 UMODL1-AS1Q8N2C9 162 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ZCCHC9Q8N567 271 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 OR8K1Q8NGG5 319 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 VOPP1Q96AW1 172 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 BIRC7Q96CA5 298 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ARHGEF26Q96DR7 871 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 EIF3CQ99613 913 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 SNRNP25Q9BV90 132 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 CEP44Q9C0F1 390 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 TMEM9BQ9NQ34 198 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 MYO1AQ9UBC5 1043 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 EIF2B4Q9UI10 523 aaKnown RBP11.43□□□□□ -0.58
SMAD4-211ENST00000590499 AP4E1Q9UPM8 1137 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 NCKAP1Q9Y2A7 1128 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 ACTL7AQ9Y615 435 aa11.43□□□□□ -0.58
SMAD4-211ENST00000590499 TMEM131Q92545 1883 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 A0A1B0GTW7 788 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 C4orf47A7E2U8 309 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 RNF103O00237 685 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 PLK4O00444 970 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 BCAT2O15382 392 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 SLC7A4O43246 635 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 KDELR3O43731 214 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 CREB3O43889 395 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 MFAP3LO75121 409 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 RNASEH2AO75792 299 aaKnown RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 RNF8O76064 485 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 GNSP15586 552 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 TCF4P15884 667 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 IL1R2P27930 398 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 CHRNA3P32297 505 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 BNC1Q01954 994 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 TBX2Q13207 712 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 ACAP1Q15027 740 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 POLD3Q15054 466 aaPredicted RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 SLC18A3Q16572 532 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 ERMARDQ5T6L9 678 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 AGBL4Q5VU57 503 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 FAM46CQ5VWP2 391 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 DAB2IPQ5VWQ8 1189 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 KIAA0895LQ68EN5 471 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 IL31Q6EBC2 164 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 NCEH1Q6PIU2 408 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 Q8N3U1 123 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 HDDC3Q8N4P3 179 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 PCDH20Q8N6Y1 951 aaKnown RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 NIPA2Q8N8Q9 360 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 CHST14Q8NCH0 376 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 TMIEQ8NEW7 156 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 OR2T34Q8NGX1 318 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 PIP4K2CQ8TBX8 421 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 GANCQ8TET4 914 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 ISG20Q96AZ6 181 aaKnown RBP11.42□□□□□ -0.58
SMAD4-211ENST00000590499 OMDQ99983 421 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 NCAPGQ9BPX3 1015 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 KRTAP9-2Q9BYQ4 174 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 KLC2Q9H0B6 622 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 TNKS2Q9H2K2 1166 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 LRRC19Q9H756 370 aa11.42□□□□□ -0.58
SMAD4-211ENST00000590499 CATSPERBQ9H7T0 1116 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms