RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 LRIG1Q96JA1 1093 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 FAM129BQ96TA1 746 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 CPEB1Q9BZB8 566 aaKnown RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 TM6SF2Q9BZW4 377 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 POLR1EQ9GZS1 481 aaKnown RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 RSPH9Q9H1X1 276 aaPredicted RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 C2orf42Q9NWW7 574 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 SEPT10Q9P0V9 454 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 ZNF148Q9UQR1 794 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 FARP1Q9Y4F1 1045 aaPredicted RBP12.23□□□□□ -0.45
APOC1-206ENST00000590334 MRFAP1Q9Y605 127 aa12.23□□□□□ -0.45
APOC1-206ENST00000590334 PRR33A8MZF0 331 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ZBTB24O43167 697 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 OPHN1O60890 802 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 STK10O94804 968 aaKnown RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 POP4O95707 220 aaKnown RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 CHRNA3P32297 505 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CD68P34810 354 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 COILP38432 576 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 MAPK8P45983 427 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 RECQLP46063 649 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 KCNJ1P48048 391 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CCR3P51677 355 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 GDF10P55107 478 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 AP1S1P61966 158 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 LMNB2Q03252 620 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 GRM3Q14832 879 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SLC14A2Q15849 920 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 P3H1Q32P28 736 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ANKRD20A2Q5SQ80 823 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ATXN7L2Q5T6C5 722 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 ANKRD20A1Q5TYW2 823 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CCDC137Q6PK04 289 aaKnown RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 DSG4Q86SJ6 1040 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SRLQ86TD4 932 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 STK40Q8N2I9 435 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CAMKK1Q8N5S9 505 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 FAM71DQ8N9W8 422 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CHST14Q8NCH0 376 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 TMIEQ8NEW7 156 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SPATA4Q8NEY3 305 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ATL2Q8NHH9 583 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 ARRDC2Q8TBH0 407 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 OR8D1Q8WZ84 308 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SLCO2A1Q92959 643 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 TADA1Q96BN2 335 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 EXOC2Q96KP1 924 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SPATA13Q96N96 652 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 AGAP3Q96P47 875 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 TUBGCP5Q96RT8 1024 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 HEPHQ9BQS7 1158 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 CEP41Q9BYV8 373 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 SLC25A51Q9H1U9 297 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 GLOD4Q9HC38 313 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 POLMQ9NP87 494 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 PRMT8Q9NR22 394 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 HECAQ9UBI9 543 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 IL36AQ9UHA7 158 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 FEZ2Q9UHY8 353 aaPredicted RBP12.22□□□□□ -0.45
APOC1-206ENST00000590334 PPM1HQ9ULR3 514 aa12.22□□□□□ -0.45
APOC1-206ENST00000590334 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 INSIG1O15503 277 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NEBLO76041 1014 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 PRNPP04156 253 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 CTSLP07711 333 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 MMP2P08253 660 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 HOXA6P31267 233 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 CXCL12P48061 93 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 SCNN1BP51168 640 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NRLP54845 237 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 MAXP61244 160 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 SATB1Q01826 763 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 ZBTB16Q05516 673 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 RAD51Q06609 339 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 CKAP4Q07065 602 aaKnown RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 NIPAL4Q0D2K0 466 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NCEH1Q6PIU2 408 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 C4orf22Q6V702 233 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 PID1Q7Z2X4 250 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 RASSF3Q86WH2 238 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 KLHDC8BQ8IXV7 354 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 SPOCK2Q92563 424 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 IMP4Q96G21 291 aaKnown RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 MRGPRX1Q96LB2 322 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NSMCE3Q96MG7 304 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 RUNDC3BQ96NL0 473 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 FCRL5Q96RD9 977 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 SEMA3CQ99985 751 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 OSBPL1AQ9BXW6 950 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 MKRN2Q9H000 416 aaKnown RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 GBA3Q9H227 469 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
APOC1-206ENST00000590334 POLR3BQ9NW08 1133 aaPredicted RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 KLHL8Q9P2G9 620 aaPredicted RBP12.21□□□□□ -0.45
APOC1-206ENST00000590334 EVLQ9UI08 416 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms