RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KDM4CQ9H3R0 1056 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 DNAAF2Q9NVR5 837 aaKnown RBP18.52■□□□□ 0.56
DDX39A-212ENST00000590260 HPCAL4Q9UM19 191 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 TFR2Q9UP52 801 aa18.52■□□□□ 0.56
DDX39A-212ENST00000590260 A0A1W2PR77 199 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 MTA2O94776 668 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 PEX11BO96011 259 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 CD59P13987 128 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 ITGB7P26010 798 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 MAT2AP31153 395 aaKnown RBP18.51■□□□□ 0.55
DDX39A-212ENST00000590260 ABL2P42684 1182 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 ZNF135P52742 658 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-212ENST00000590260 GEMIN4P57678 1058 aaKnown RBP18.51■□□□□ 0.55
DDX39A-212ENST00000590260 KIF19Q2TAC6 998 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 UAP1L1Q3KQV9 507 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 PPM1JQ5JR12 505 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 TRIM69Q86WT6 500 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 ZNF354CQ86Y25 554 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 KLHL11Q9NVR0 708 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 GGT7Q9UJ14 662 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 FARP1Q9Y4F1 1045 aaPredicted RBP18.51■□□□□ 0.55
DDX39A-212ENST00000590260 SNX11Q9Y5W9 270 aa18.51■□□□□ 0.55
DDX39A-212ENST00000590260 H3BRJ5 948 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 KCNK3O14649 394 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 MUSKO15146 869 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 DAPK3O43293 454 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 RNGTTO60942 597 aaKnown RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 LCA5LO95447 670 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 ADRB3P13945 408 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 FECHP22830 423 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 RECQLP46063 649 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 GRIA4P48058 902 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 AFF3P51826 1226 aaKnown RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 CDH6P55285 790 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 DPYSL3Q14195 570 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 PIP4P1Q86T03 277 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 CASKIN2Q8WXE0 1202 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 UBA2Q9UBT2 640 aaPredicted RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 CA5BQ9Y2D0 317 aa18.5■□□□□ 0.55
DDX39A-212ENST00000590260 FNDC3AQ9Y2H6 1198 aaKnown RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 ASCC3Q8N3C0 2202 aaKnown RBP18.5■□□□□ 0.55
DDX39A-212ENST00000590260 ARHGAP42A6NI28 874 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 C16orf96A6NNT2 1141 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 TMEM110-MUSTN1A8MSY1 372 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 DFFAO00273 331 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 KRIT1O00522 736 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 KCNK5O95279 499 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 UGT2B4P06133 528 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 SYPP08247 313 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 ITIH2P19823 946 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 GJC1P36383 396 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 CTSKP43235 329 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 NEK3P51956 506 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 RHOAP61586 193 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 SNRPD1P62314 119 aaKnown RBP18.49■□□□□ 0.55
DDX39A-212ENST00000590260 RACK1P63244 317 aaKnown RBP18.49■□□□□ 0.55
DDX39A-212ENST00000590260 FGL2Q14314 439 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 TCEAL1Q15170 157 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 ZNF284Q2VY69 593 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 HLA-BQ31612 363 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 TMEM259Q4ZIN3 620 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 SEL1L3Q68CR1 1132 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 RYBPQ8N488 228 aaPredicted RBP18.49■□□□□ 0.55
DDX39A-212ENST00000590260 TSEN2Q8NCE0 465 aaKnown RBP18.49■□□□□ 0.55
DDX39A-212ENST00000590260 PCDH19Q8TAB3 1148 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 KLK6Q92876 244 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 KLHL32Q96NJ5 620 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 PREBQ9HCU5 417 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 ITM2BQ9Y287 266 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 ANKRD6Q9Y2G4 727 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 FADS3Q9Y5Q0 445 aa18.49■□□□□ 0.55
DDX39A-212ENST00000590260 A0A1W2PQU0 124 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 BUB1BO60566 1050 aaPredicted RBP18.48■□□□□ 0.55
DDX39A-212ENST00000590260 POP4O95707 220 aaKnown RBP18.48■□□□□ 0.55
DDX39A-212ENST00000590260 MAN1A1P33908 653 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 ARL4AP40617 200 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 IL10RBQ08334 325 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 MESDQ14696 234 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 LRRC73Q5JTD7 316 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 ZSWIM9Q86XI8 627 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 RFFLQ8WZ73 363 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 FAF2Q96CS3 445 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 LRIG1Q96JA1 1093 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 GDAP1L1Q96MZ0 367 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 ZDHHC5Q9C0B5 715 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 CAAP1Q9H8G2 361 aa18.48■□□□□ 0.55
DDX39A-212ENST00000590260 IPO11Q9UI26 975 aaKnown RBP18.48■□□□□ 0.55
DDX39A-212ENST00000590260 UPK3BL1B0FP48 263 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 UPK3BL2E5RIL1 263 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 VILLO15195 856 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 MFSD11O43934 449 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 MAFKO60675 156 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 OPHN1O60890 802 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 PIGNO95427 931 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 IGSF6O95976 241 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 PRLRP16471 622 aa18.47■□□□□ 0.55
DDX39A-212ENST00000590260 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
DDX39A-212ENST00000590260 FAM193AP78312 1265 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms