RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	CSNK1E	P49674	416 aa	Known RBP	17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	CDH6	P55285	790 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	DPYSL3	Q14195	570 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	ERN2	Q76MJ5	926 aa	Known RBP	17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	PARS2	Q7L3T8	475 aa	Known RBP	17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	RABEPK	Q7Z6M1	372 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	PCDH19	Q8TAB3	1148 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	CASKIN2	Q8WXE0	1202 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	RFFL	Q8WZ73	363 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	ZDHHC6	Q9H6R6	413 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	KLHL11	Q9NVR0	708 aa		17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	ZFR2	Q9UPR6	939 aa	Known RBP	17.58	■□□□□ 0.4
MBD1-221	ENST00000589867	ANKRD36	A6QL64	1941 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3D	A0A087WVF3	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3I	A0A087WXS9	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3E	A0A087X179	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3K	A0A087X1G2	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867		A0A1B0GVT2	93 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867		A0A1W2PR77	199 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3F	A6NER0	549 aa	Predicted RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	ARHGAP42	A6NI28	874 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3L	B9A6J9	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	MUSK	O15146	869 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3H	P0C7X1	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	GNS	P15586	552 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	ITGB7	P26010	798 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	ARL4A	P40617	200 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	ABL2	P42684	1182 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	SNRPD1	P62314	119 aa	Known RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	MESD	Q14696	234 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3G	Q6DHY5	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3C	Q6IPX1	549 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TRIM69	Q86WT6	500 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	ZNF354C	Q86Y25	554 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	TBC1D3	Q8IZP1	549 aa	Predicted RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	MINDY1	Q8N5J2	469 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	RAPGEF5	Q92565	580 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	FAF2	Q96CS3	445 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	EXOC2	Q96KP1	924 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	PANX2	Q96RD6	677 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	IL21R	Q9HBE5	538 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	DNAAF2	Q9NVR5	837 aa	Known RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	DONSON	Q9NYP3	566 aa		17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	UBA2	Q9UBT2	640 aa	Predicted RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	IPO11	Q9UI26	975 aa	Known RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	REXO2	Q9Y3B8	237 aa	Known RBP	17.57	■□□□□ 0.4
MBD1-221	ENST00000589867	RCCD1	A6NED2	376 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	SOWAHD	A6NJG2	315 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	TMEM110-MUSTN1	A8MSY1	372 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	DFFA	O00273	331 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	BUB1B	O60566	1050 aa	Predicted RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	POP4	O95707	220 aa	Known RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	ADRB3	P13945	408 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	GJC1	P36383	396 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	FGL2	Q14314	439 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	HADH	Q16836	314 aa	Known RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	KIF19	Q2TAC6	998 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	ZNF284	Q2VY69	593 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	RAD9B	Q6WBX8	426 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	DGLUCY	Q7Z3D6	616 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	TMEM139	Q8IV31	216 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	LZTR1	Q8N653	840 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	PQLC3	Q8N755	202 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	TSEN2	Q8NCE0	465 aa	Known RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	GTPBP2	Q9BX10	602 aa	Known RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	PREB	Q9HCU5	417 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	RCOR3	Q9P2K3	495 aa	Predicted RBP	17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	SALL4	Q9UJQ4	1053 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	HYOU1	Q9Y4L1	999 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	FADS3	Q9Y5Q0	445 aa		17.56	■□□□□ 0.4
MBD1-221	ENST00000589867	LRRK1	Q38SD2	2015 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	SPEG	Q15772	3267 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	MED19	A0JLT2	244 aa	Predicted RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	C3orf70	A6NLC5	250 aa	Predicted RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	C16orf96	A6NNT2	1141 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	KRIT1	O00522	736 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	MAFK	O60675	156 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	UGT2B4	P06133	528 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	CD59	P13987	128 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	MAT2A	P31153	395 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	SSR1	P43307	286 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	MAGEA1	P43355	309 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	GRIA4	P48058	902 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	AFF3	P51826	1226 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	HADHB	P55084	474 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	RHOA	P61586	193 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	RACK1	P63244	317 aa	Known RBP	17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	IL10RB	Q08334	325 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	TMEM259	Q4ZIN3	620 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	ZNF805	Q5CZA5	627 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	SEL1L3	Q68CR1	1132 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	NCBP2-AS2	Q69YL0	99 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	TMCO3	Q6UWJ1	677 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	PIP4P1	Q86T03	277 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	RHOT2	Q8IXI1	618 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	CCDC170	Q8IYT3	715 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	LRIG1	Q96JA1	1093 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	GDAP1L1	Q96MZ0	367 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	KLHL32	Q96NJ5	620 aa		17.55	■□□□□ 0.4
MBD1-221	ENST00000589867	GGT7	Q9UJ14	662 aa		17.55	■□□□□ 0.4

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms