RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SLCO2A1Q92959 643 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 NUDCD1Q96RS6 583 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 CARD6Q9BX69 1037 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 GLOD4Q9HC38 313 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 HECAQ9UBI9 543 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 RSPH14Q9UHP6 348 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 MMP17Q9ULZ9 603 aa15.4■□□□□ 0.06
ATG4D-211ENST00000589753 FARP1Q9Y4F1 1045 aaPredicted RBP15.4■□□□□ 0.06
ATG4D-211ENST00000589753 SIN3BO75182 1162 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 NFKB1P19838 968 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 CR2P20023 1033 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 CES1P23141 567 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 CD68P34810 354 aaPredicted RBP15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PTGIRP43119 386 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 CCNHP51946 323 aaPredicted RBP15.39■□□□□ 0.05
ATG4D-211ENST00000589753 DR1Q01658 176 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 DSC2Q02487 901 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 DHX34Q14147 1143 aaKnown RBP15.39■□□□□ 0.05
ATG4D-211ENST00000589753 MYLK3Q32MK0 819 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 RALGPS1Q5JS13 557 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 ALG1LQ6GMV1 187 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PKN3Q6P5Z2 889 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 DPY19L3Q6ZPD9 716 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 SRLQ86TD4 932 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.39■□□□□ 0.05
ATG4D-211ENST00000589753 GLIS1Q8NBF1 620 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 SEMA3CQ99985 751 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 SLC25A51Q9H1U9 297 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 GBA3Q9H227 469 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 CHRDQ9H2X0 955 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PCDH9Q9HC56 1237 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 SCUBE2Q9NQ36 999 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PRSS16Q9NQE7 514 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 PAK5Q9P286 719 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 EVLQ9UI08 416 aaPredicted RBP15.39■□□□□ 0.05
ATG4D-211ENST00000589753 F5P12259 2224 aa15.39■□□□□ 0.05
ATG4D-211ENST00000589753 TTC24A2A3L6 582 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 INSIG1O15503 277 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 GJB3O75712 270 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 POP4O95707 220 aaKnown RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 KRT14P02533 472 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 DCNP07585 359 aaKnown RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 ZSCAN5DPP0CG00 497 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 RPL22P35268 128 aaKnown RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 MAGEA9P43362 315 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 MAPK8P45983 427 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 AP1S1P61966 158 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 RAD51Q06609 339 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 CAMK2GQ13555 558 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 GAS6Q14393 721 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 ELAVL3Q14576 367 aaKnown RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 PPP1R7Q15435 360 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 TRIP13Q15645 432 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 C4orf22Q6V702 233 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 SYT13Q7L8C5 426 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 STK40Q8N2I9 435 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 CHST14Q8NCH0 376 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 OR6K2Q8NGY2 324 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 ARRDC2Q8TBH0 407 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 OR8D1Q8WZ84 308 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 IMP4Q96G21 291 aaKnown RBP15.38■□□□□ 0.05
ATG4D-211ENST00000589753 FCRL5Q96RD9 977 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 HEPHQ9BQS7 1158 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 ZDHHC6Q9H6R6 413 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 NOD2Q9HC29 1040 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 NEU2Q9Y3R4 380 aa15.38■□□□□ 0.05
ATG4D-211ENST00000589753 A0A1W2PQF6 199 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 F5H423 210 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-211ENST00000589753 TNFRSF10AO00220 468 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 ALOX15BO15296 676 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 TTI1O43156 1089 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 AOC1P19801 751 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 COL9A1P20849 921 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 PSMB4P28070 264 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 CD86P42081 329 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 NIPAL4Q0D2K0 466 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 PTK6Q13882 451 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 PRPSAP1Q14558 356 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 GRM3Q14832 879 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 CRY1Q16526 586 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 KCTD19Q17RG1 926 aaPredicted RBP15.37■□□□□ 0.05
ATG4D-211ENST00000589753 PARP6Q2NL67 630 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 KIAA1211LQ6NV74 962 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 NCEH1Q6PIU2 408 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 MAATS1Q7Z4T9 603 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 DSG4Q86SJ6 1040 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 JAMLQ86YT9 394 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 SPEM1Q8N4L4 309 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 MMGT1Q8N4V1 131 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 CCHCR1Q8TD31 782 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 TUBGCP5Q96RT8 1024 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 IER2Q9BTL4 223 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 CPEB1Q9BZB8 566 aaKnown RBP15.37■□□□□ 0.05
ATG4D-211ENST00000589753 FBRSQ9HAH7 460 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 IL36AQ9UHA7 158 aa15.37■□□□□ 0.05
ATG4D-211ENST00000589753 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.36■□□□□ 0.05
ATG4D-211ENST00000589753 RAD51CO43502 376 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms