RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 WDR91A4D1P6 747 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 J3KR12 359 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PRRG1O14668 218 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PLIN3O60664 434 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PMPCBO75439 489 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 SNUPNO95149 360 aaKnown RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 SEC24AO95486 1093 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 ALDOAP04075 364 aaKnown RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 FGF1P05230 155 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 TPH1P17752 444 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 NMBRP28336 390 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 CRABP2P29373 138 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 KPNA2P52292 529 aaKnown RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 ARFIP2P53365 341 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 OXCT1P55809 520 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 WDR5P61964 334 aaKnown RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 TMPRSS15P98073 1019 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 SLC10A7Q0GE19 358 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 ASPHQ12797 758 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 STX3Q13277 289 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PDE1CQ14123 709 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 TAF1BQ53T94 588 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 N4BP2L1Q5TBK1 243 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 FSTL4Q6MZW2 842 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 CES3Q6UWW8 571 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 CDHR3Q6ZTQ4 885 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 CCDC149Q6ZUS6 474 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 DNAJB7Q7Z6W7 309 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 DCLK2Q8N568 766 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PPP1R14CQ8TAE6 165 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 ARRDC2Q8TBH0 407 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 C10orf82Q8WW14 230 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PTPRN2Q92932 1015 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 GPR22Q99680 433 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 APOL2Q9BQE5 337 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 COL25A1Q9BXS0 654 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 IL23AQ9NPF7 189 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 SNX15Q9NRS6 342 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 PIH1D1Q9NWS0 290 aaKnown RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 KCNK4Q9NYG8 393 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 UBP1Q9NZI7 540 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 TBC1D30Q9Y2I9 924 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 CAPN7Q9Y6W3 813 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 FNDC1Q4ZHG4 1894 aaPredicted RBP10.52□□□□□ -0.73
VPS25-203ENST00000589520 HTTP42858 3142 aa10.52□□□□□ -0.73
VPS25-203ENST00000589520 SOBPA7XYQ1 873 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 SLC7A4O43246 635 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 LILRB3O75022 631 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 DNAJC6O75061 913 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 STC2O76061 302 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 FGF19O95750 216 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 SERPINE1P05121 402 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 RHOCP08134 193 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 SERPINF2P08697 491 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 CTSAP10619 480 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 RPL17P18621 184 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 BGNP21810 368 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 CD86P42081 329 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 ARCN1P48444 511 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 LIG3P49916 1009 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 KCNQ1P51787 676 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 POU4F1Q01851 419 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
VPS25-203ENST00000589520 TWF1Q12792 350 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 SLC12A1Q13621 1099 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 FAM133BQ5BKY9 247 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 FAM182AQ5T1J6 154 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 TSTD2Q5T7W7 516 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 NEPROQ6NW34 567 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 METTL3Q86U44 580 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 DENND1CQ8IV53 801 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 C10orf67Q8IYJ2 551 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 UNC5BQ8IZJ1 945 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 C2CD4AQ8NCU7 369 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 PPP4R1Q8TF05 950 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 USP13Q92995 863 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 VWCEQ96DN2 955 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 IFT43Q96FT9 208 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 TSPAN17Q96FV3 270 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 PAWRQ96IZ0 340 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 VPS39Q96JC1 886 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 PSKH2Q96QS6 385 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 YME1L1Q96TA2 773 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 MGME1Q9BQP7 344 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 TRIM56Q9BRZ2 755 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 ACE2Q9BYF1 805 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 PDFQ9HBH1 243 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 TRPC7Q9HCX4 862 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 SLCO1B3Q9NPD5 702 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 UBA2Q9UBT2 640 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 CORO1CQ9ULV4 474 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 SORCS3Q9UPU3 1222 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 INSL5Q9Y5Q6 135 aa10.51□□□□□ -0.73
VPS25-203ENST00000589520 MRPL42Q9Y6G3 142 aaKnown RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 ZFP37Q9Y6Q3 630 aaPredicted RBP10.51□□□□□ -0.73
VPS25-203ENST00000589520 A0A087X1B8 175 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 A0A096LPK6 155 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 TMEM114B3SHH9 223 aa10.5□□□□□ -0.73
VPS25-203ENST00000589520 SNNO75324 88 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms