RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 K7ERQ8 282 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 STK25O00506 426 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 INSIG1O15503 277 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 PSMD3O43242 534 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 SMAD6O43541 496 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 POP4O95707 220 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 KRT14P02533 472 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 EPHX1P07099 455 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 SERPINF2P08697 491 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CHRM1P11229 460 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CR2P20023 1033 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 TNNT3P45378 269 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 C2orf27AQ580R0 203 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 TRIM67Q6ZTA4 783 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 Q6ZVU0 165 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 B4GALNT4Q76KP1 1039 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 JAMLQ86YT9 394 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CNTD1Q8N815 330 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 IL17RCQ8NAC3 791 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 RPLP0P6Q8NHW5 317 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CCDC110Q8TBZ0 833 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 OR8D1Q8WZ84 308 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CLDN23Q96B33 292 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 OSBPL1AQ9BXW6 950 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CPEB1Q9BZB8 566 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 C10orf88Q9H8K7 445 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 LMAN1LQ9HAT1 526 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 CACNA2D2Q9NY47 1150 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 HECAQ9UBI9 543 aaPredicted RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 MMP17Q9ULZ9 603 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 UTP11Q9Y3A2 253 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 SIT1Q9Y3P8 196 aa17.2■□□□□ 0.34
SCAMP4-211ENST00000588907 ZBTB24O43167 697 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 SOCS5O75159 536 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ZNF821O75541 412 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 SLU7O95391 586 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 KLF8O95600 359 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 PRNPP04156 253 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 HOXB2P14652 356 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 PTGIRP43119 386 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 SCNN1BP51168 640 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 MPP3Q13368 585 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 CAMK2GQ13555 558 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 PCGF5Q86SE9 256 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 SRLQ86TD4 932 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 BBOF1Q8ND07 529 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 OR2A12Q8NGT7 310 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 PTPRN2Q92932 1015 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 IMP4Q96G21 291 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ZNF419Q96HQ0 510 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 SEMA3CQ99985 751 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 HEPHQ9BQS7 1158 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 CEP41Q9BYV8 373 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 TM6SF2Q9BZW4 377 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ATP13A3Q9H7F0 1226 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ASIC3Q9UHC3 531 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 HCN2Q9UL51 889 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 NEU2Q9Y3R4 380 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ARIH1Q9Y4X5 557 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 ACTL7AQ9Y615 435 aa17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 MYO18AQ92614 2054 aaKnown RBP17.19■□□□□ 0.34
SCAMP4-211ENST00000588907 CKAP5Q14008 2032 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 SMAPO00193 183 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 RNASEH1O60930 286 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 NFKB1P19838 968 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 PRKCHP24723 683 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 SERPINA4P29622 427 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 CD68P34810 354 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 RPL22P35268 128 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 CCNHP51946 323 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 GEMP55040 296 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 MYLK3Q32MK0 819 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 C9orf64Q5T6V5 341 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 EMC10Q5UCC4 262 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 SYT13Q7L8C5 426 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 PGBD5Q8N414 524 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 RYBPQ8N488 228 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 TXNDC5Q8NBS9 432 aaKnown RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 ZNF641Q96N77 438 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 FOXQ1Q9C009 403 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 TNKS2Q9H2K2 1166 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 CHRDQ9H2X0 955 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 IL36AQ9UHA7 158 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 FAM153AQ9UHL3 310 aa17.18■□□□□ 0.34
SCAMP4-211ENST00000588907 EFCAB8A8MWE9 144 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 E7EVH7 732 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 C1QTNF3-AMACRE9PGA6 284 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 MUSKO15146 869 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 TTI1O43156 1089 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 RAD51CO43502 376 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 SIN3BO75182 1162 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 NFKBIAP25963 317 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 PSMB4P28070 264 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 DGKEP52429 567 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 MAXP61244 160 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 CDK16Q00536 496 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 SFSWAPQ12872 951 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 GPS1Q13098 491 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 SEMA5AQ13591 1074 aa17.17■□□□□ 0.34
SCAMP4-211ENST00000588907 FAM46CQ5VWP2 391 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms