RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 NDFIP2Q9NV92 336 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 KIAA1468Q9P260 1216 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 ITM2BQ9Y287 266 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 PAXBP1Q9Y5B6 917 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 CSNK1G3Q9Y6M4 447 aa18.76■□□□□ 0.59
CCDC43-204ENST00000588687 MAST4O15021 2626 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 LRP4O75096 1905 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 CXorf51AA0A1B0GTR3 108 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 FAM170AA1A519 330 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 CASC3O15234 703 aaKnown RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 CYP11B1P15538 503 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 RECQLP46063 649 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 RABIFP47224 123 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 PDX1P52945 283 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 TMPRSS3P57727 454 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 SLC20A2Q08357 652 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 EIF2B5Q13144 721 aaKnown RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 RAB6CQ53S08 254 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 CARD16Q5EG05 197 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 FAM131BQ86XD5 332 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 PLPP6Q8IY26 295 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 MAPK15Q8TD08 544 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 C18orf8Q96DM3 657 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 PRR11Q96HE9 360 aaPredicted RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 CFAP57Q96MR6 1250 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 SPON2Q9BUD6 331 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 RAB6CQ9H0N0 254 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 PPARGC1AQ9UBK2 798 aaKnown RBP18.75■□□□□ 0.59
CCDC43-204ENST00000588687 FHOD1Q9Y613 1164 aa18.75■□□□□ 0.59
CCDC43-204ENST00000588687 PMS2P1A4D2B8 440 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 EME2A4GXA9 379 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-204ENST00000588687 AQP9O43315 295 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 SRGAP2O75044 1071 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 GKP32189 559 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ACVRL1P37023 503 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 DUSP3P51452 185 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-204ENST00000588687 CFHR1Q03591 330 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 PDE1CQ14123 709 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-204ENST00000588687 CDKN3Q16667 212 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 MAN2A1Q16706 1144 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ARCQ7LC44 396 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 NLRP14Q86W24 1093 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 DENND6BQ8NEG7 585 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ASB12Q8WXK4 309 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 TTC9Q92623 222 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ISG20Q96AZ6 181 aaKnown RBP18.74■□□□□ 0.59
CCDC43-204ENST00000588687 VCPIP1Q96JH7 1222 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 FEM1CQ96JP0 617 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 TM6SF2Q9BZW4 377 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 TCEAL2Q9H3H9 227 aaPredicted RBP18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ZDHHC6Q9H6R6 413 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 TMEM51Q9NW97 253 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 SATB2Q9UPW6 733 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 ENTPD2Q9Y5L3 495 aa18.74■□□□□ 0.59
CCDC43-204ENST00000588687 IGLON5A6NGN9 336 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 AREL1O15033 823 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 UCNP55089 124 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 NOMO3P69849 1222 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 NRG1Q02297 640 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-204ENST00000588687 DRAP1Q14919 205 aaPredicted RBP18.73■□□□□ 0.59
CCDC43-204ENST00000588687 DEFB133Q30KQ1 61 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 PERM1Q5SV97 790 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 NOP9Q86U38 636 aaKnown RBP18.73■□□□□ 0.59
CCDC43-204ENST00000588687 CREBRFQ8IUR6 639 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 DRC7Q8IY82 874 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 RBFAQ8N0V3 343 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 OR6K2Q8NGY2 324 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 KCNE4Q8WWG9 221 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 WBP1Q96G27 269 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 ATXN7L3BQ96GX2 97 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 BOCQ9BWV1 1114 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 SEMA4CQ9C0C4 833 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 OSBPL2Q9H1P3 480 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 THSD1Q9NS62 852 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 SALL4Q9UJQ4 1053 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 LRRK1Q38SD2 2015 aa18.73■□□□□ 0.59
CCDC43-204ENST00000588687 C16orf96A6NNT2 1141 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 H3BM21 787 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 TPP1O14773 563 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 TSPAN6O43657 245 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 GCATO75600 419 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 LSM8O95777 96 aaKnown RBP18.72■□□□□ 0.59
CCDC43-204ENST00000588687 JUNDP17535 347 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 IGFALSP35858 605 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 MTIF2P46199 727 aaKnown RBP18.72■□□□□ 0.59
CCDC43-204ENST00000588687 BPIFB4P59827 614 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 RHDQ02161 417 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 C3orf38Q5JPI3 329 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 EFL1Q7Z2Z2 1120 aaKnown RBP18.72■□□□□ 0.59
CCDC43-204ENST00000588687 ZNF605Q86T29 641 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 EMC1Q8N766 993 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 EPS8L1Q8TE68 723 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 ARHGEF2Q92974 986 aaKnown RBP18.72■□□□□ 0.59
CCDC43-204ENST00000588687 RAB7BQ96AH8 199 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 CENPTQ96BT3 561 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 LRRC61Q9BV99 259 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 DPH1Q9BZG8 443 aa18.72■□□□□ 0.59
CCDC43-204ENST00000588687 NDST4Q9H3R1 872 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms