RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PPP2CBP62714 309 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 PPP2CAP67775 309 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 FOXK2Q01167 660 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 BNC1Q01954 994 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 CNTN1Q12860 1018 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 GRIK2Q13002 908 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 SERINC3Q13530 473 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 POLD3Q15054 466 aaPredicted RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 IFI16Q16666 785 aaKnown RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 INO80DQ53TQ3 878 aaPredicted RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 NCEH1Q6PIU2 408 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 DPY19L3Q6ZPD9 716 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 RFX8Q6ZV50 586 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 DGLUCYQ7Z3D6 616 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 TRIM69Q86WT6 500 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 ARHGAP12Q8IWW6 846 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 RGL4Q8IZJ4 473 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 RNF10Q8N5U6 811 aaKnown RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 CHST14Q8NCH0 376 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 CASKIN2Q8WXE0 1202 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 TSC1Q92574 1164 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 ARRDC3Q96B67 414 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 HMCESQ96FZ2 354 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 OMDQ99983 421 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 SPON2Q9BUD6 331 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.79□□□□□ -1
ATG4D-202ENST00000585437 NUP85Q9BW27 656 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 PACSIN1Q9BY11 444 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 ZDHHC5Q9C0B5 715 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 TNKS2Q9H2K2 1166 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 DHX35Q9H5Z1 703 aaKnown RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 EBF2Q9HAK2 575 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 FSCN3Q9NQT6 498 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 DNAAF2Q9NVR5 837 aaKnown RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 UVRAGQ9P2Y5 699 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 IL36AQ9UHA7 158 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 PCSK1NQ9UHG2 260 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 IP6K2Q9UHH9 426 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 ANAPC7Q9UJX3 599 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 FCF1Q9Y324 198 aaKnown RBP8.79□□□□□ -1
ATG4D-202ENST00000585437 JRKLQ9Y4A0 524 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 SPTBN2O15020 2390 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 PTPRBP23467 1997 aa8.79□□□□□ -1
ATG4D-202ENST00000585437 CNOT1A5YKK6 2376 aaKnown RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 DCDC2BA2VCK2 349 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CTAGE15A4D2H0 777 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 EEF2KO00418 725 aaKnown RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 PLK4O00444 970 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 LEFTY1O75610 366 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 MTA2O94776 668 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 TMCC1O94876 653 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 SYPP08247 313 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 TMEM253P0C7T8 217 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 ZNF883P0CG24 379 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CTAGE8P0CG41 777 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 RARAP10276 462 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 ITGB7P26010 798 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 MAN1A1P33908 653 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 AFF3P51826 1226 aaKnown RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 BOLA3Q53S33 107 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CARD16Q5EG05 197 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 PAPD7Q5XG87 772 aaKnown RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 TXNRD3NBQ6F5E7 133 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 PIP4P1Q86T03 277 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CTAGE6Q86UF2 777 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CTAGE4Q8IX94 777 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 MINDY1Q8N5J2 469 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 NPWQ8N729 165 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 OR2AP1Q8NGE2 309 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 ZNF564Q8TBZ8 553 aaPredicted RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 LRIG1Q96JA1 1093 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 BTBD6Q96KE9 485 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 HDAC8Q9BY41 377 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 PREBQ9HCU5 417 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 TM9SF3Q9HD45 589 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 DONSONQ9NYP3 566 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 CWC15Q9P013 229 aaKnown RBP8.78□□□□□ -1
ATG4D-202ENST00000585437 LHX3Q9UBR4 397 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 HPCAL4Q9UM19 191 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 MFHAS1Q9Y4C4 1052 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 SAR1BQ9Y6B6 198 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 PCNX2A6NKB5 2137 aa8.78□□□□□ -1
ATG4D-202ENST00000585437 MED19A0JLT2 244 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-202ENST00000585437 MACROD2A1Z1Q3 448 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 BTNL10A8MVZ5 291 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 KPNA3O00505 521 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-202ENST00000585437 SPINT1O43278 529 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 PRAMEF11O60813 436 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 PROSCO94903 275 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 FSBPO95073 299 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 H2AFZP0C0S5 128 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 TCP1P17987 556 aaKnown RBP8.77□□□□□ -1.01
ATG4D-202ENST00000585437 ERCC2P18074 760 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 CSRP1P21291 193 aaKnown RBP8.77□□□□□ -1.01
ATG4D-202ENST00000585437 NUDT1P36639 197 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 MAPK8P45983 427 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 RECQLP46063 649 aaPredicted RBP8.77□□□□□ -1.01
ATG4D-202ENST00000585437 ARSEP51690 589 aa8.77□□□□□ -1.01
ATG4D-202ENST00000585437 RACK1P63244 317 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms