RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SERPINA6P08185 405 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MYL4P12829 197 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NRLP54845 237 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MLLT6P55198 1093 aaPredicted RBP15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TEX44Q53QW1 395 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 RWDD4Q6NW29 188 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 LRRC8BQ6P9F7 803 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 GAREM2Q75VX8 874 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ZNF534Q76KX8 674 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ADGRD2Q7Z7M1 963 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 C14orf80Q86SX3 495 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NETO2Q8NC67 525 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 GDPD5Q8WTR4 605 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 LRRN4Q8WUT4 740 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TFB1MQ8WVM0 346 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 BTN2A3PQ96KV6 586 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 C1orf74Q96LT6 269 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 OLFM3Q96PB7 478 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 C12orf65Q9H3J6 166 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 STX18Q9P2W9 335 aaKnown RBP15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ZNF212Q9UDV6 495 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SUFUQ9UMX1 484 aa15.23■□□□□ 0.03
CDK5RAP3-236ENST00000584991 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NUP205Q92621 2012 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 A0A0A0MRY4 1105 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 OPHN1O60890 802 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 GLRA3O75311 464 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ENTPD5O75356 428 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 METTL18O95568 372 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 C1RP00736 705 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CYP4F8P98187 520 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 STX3Q13277 289 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 PAFAH1B3Q15102 231 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MS4A13Q5J8X5 152 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 C6orf163Q5TEZ5 329 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MANEALQ5VSG8 457 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TXNDC8Q6A555 127 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CDHR3Q6ZTQ4 885 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 WDR75Q8IWA0 830 aaKnown RBP15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NDUFAF2Q8N183 169 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HTR3CQ8WXA8 447 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 DNAJC9Q8WXX5 260 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SPATA13Q96N96 652 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CYP2S1Q96SQ9 504 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 GKN1Q9NS71 199 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 HCFC1R1Q9NWW0 138 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 RAD54BQ9Y620 910 aa15.22■□□□□ 0.03
CDK5RAP3-236ENST00000584991 EPOPA6NHQ4 379 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 E9PAM4 449 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SMNDC1O75940 238 aaKnown RBP eCLIP15.21■□□□□ 0.032e-22■□□□□ 9.5
CDK5RAP3-236ENST00000584991 MBL2P11226 248 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 COG7P83436 770 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SLC34A1Q06495 639 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 CHI3L2Q15782 390 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 KHDC1Q4VXA5 237 aaKnown RBP15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ARTNQ5T4W7 220 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 RTL10Q7L3V2 364 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NET1Q7Z628 596 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ARMC2Q8NEN0 867 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 DEPDC1BQ8WUY9 529 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 STMN2Q93045 179 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SLC22A12Q96S37 553 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ATXN3LQ9H3M9 355 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 ASAH2Q9NR71 780 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 FBXO6Q9NRD1 293 aaPredicted RBP15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 SMYD2Q9NRG4 433 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 TAGLN3Q9UI15 199 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 VANGL2Q9ULK5 521 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 NEU3Q9UQ49 428 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 MAD1L1Q9Y6D9 718 aa15.21■□□□□ 0.03
CDK5RAP3-236ENST00000584991 DOCK4Q8N1I0 1966 aa15.21■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FAM237BA0A1B0GVD1 139 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 A6NHS1 94 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PSMG1O95456 288 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 IRF1P10914 325 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 GJA1P17302 382 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 GRK2P25098 689 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NRG1Q02297 640 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MTM1Q13496 603 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 FRG1Q14331 258 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CCDC6Q16204 474 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 RAP1GAP2Q684P5 730 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TP53INP2Q8IXH6 220 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 TDHQ8IZJ6 230 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 KLF16Q9BXK1 252 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HCFC2Q9Y5Z7 792 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HMX2A2RU54 273 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 RFXAPO00287 272 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NRG2O14511 850 aaPredicted RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 NVLO15381 856 aaKnown RBP15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 STC2O76061 302 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 KLHL2O95198 593 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 PGAM1P18669 254 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 HDCP19113 662 aa15.2■□□□□ 0.02
CDK5RAP3-236ENST00000584991 CDC25CP30307 473 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms