RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 ASPMQ8IZT6 3477 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 PLXNB3Q9ULL4 1909 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 SPEGQ15772 3267 aa18.17■□□□□ 0.5
ERBB2-221ENST00000584888 C1QTNF3-AMACRE9PGA6 284 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 FGF10O15520 208 aaPredicted RBP18.16■□□□□ 0.5
ERBB2-221ENST00000584888 BNIP3LO60238 219 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 CNTN1Q12860 1018 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 SHBQ15464 509 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 INAVAQ3KP66 663 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 POM121L1PQ3SYA9 428 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 CCDC122Q5T0U0 273 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 AGBL4Q5VU57 503 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 SARM1Q6SZW1 724 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 DPY19L3Q6ZPD9 716 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 PRPF39Q86UA1 669 aaKnown RBP18.16■□□□□ 0.5
ERBB2-221ENST00000584888 NIPA2Q8N8Q9 360 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 ARHGEF26Q96DR7 871 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 TNKS2Q9H2K2 1166 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 LRRC19Q9H756 370 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 CATSPERBQ9H7T0 1116 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 GDF3Q9NR23 364 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 FARP1Q9Y4F1 1045 aaPredicted RBP18.16■□□□□ 0.5
ERBB2-221ENST00000584888 WASF2Q9Y6W5 498 aa18.16■□□□□ 0.5
ERBB2-221ENST00000584888 SSU72P8A0A1W2PR75 194 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 TLR4O00206 839 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 PLRG1O43660 514 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 IL1R2P27930 398 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 MAT2AP31153 395 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 HCAR3P49019 387 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 GEMIN4P57678 1058 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 TAS2R38P59533 333 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 TBX2Q13207 712 aaPredicted RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 SERINC3Q13530 473 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 CCDC157Q569K6 752 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 SLC45A4Q5BKX6 768 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 CARD16Q5EG05 197 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 NAPEPLDQ6IQ20 393 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 SAP25Q8TEE9 199 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 ARRDC3Q96B67 414 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 CCDC114Q96M63 670 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 DHX35Q9H5Z1 703 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 CCDC86Q9H6F5 360 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 FTSJ1Q9UET6 329 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 FCF1Q9Y324 198 aaKnown RBP18.15■□□□□ 0.5
ERBB2-221ENST00000584888 FAM208BQ5VWN6 2430 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 PTPRBP23467 1997 aa18.15■□□□□ 0.5
ERBB2-221ENST00000584888 ZSCAN5CA6NGD5 496 aaPredicted RBP18.14■□□□□ 0.49
ERBB2-221ENST00000584888 RASA4BC9J798 803 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 RASA4O43374 803 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PRPSAP2O60256 369 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PRNPP04156 253 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 ITGAVP06756 1048 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 TCF4P15884 667 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 ZNF135P52742 658 aaPredicted RBP18.14■□□□□ 0.49
ERBB2-221ENST00000584888 NXPH1P58417 271 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 TPI1P60174 286 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PIGHQ14442 188 aaPredicted RBP18.14■□□□□ 0.49
ERBB2-221ENST00000584888 SLC18A3Q16572 532 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PARP15Q460N3 678 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 ARSIQ5FYB1 569 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PIP5KL1Q5T9C9 394 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 AFMIDQ63HM1 303 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 MARCH9Q86YJ5 346 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 GALNT15Q8N3T1 639 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 MFSD2AQ8NA29 543 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 HMCESQ96FZ2 354 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 HEPHQ9BQS7 1158 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 NUP85Q9BW27 656 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 IL36AQ9UHA7 158 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 HPCAL4Q9UM19 191 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 DMTF1Q9Y222 760 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 PKD1L2Q7Z442 2459 aa18.14■□□□□ 0.49
ERBB2-221ENST00000584888 TP53BP1Q12888 1972 aaPredicted RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 ZZEF1O43149 2961 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 GOLGA4Q13439 2230 aaKnown RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 EEF2KO00418 725 aaKnown RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 YKT6O15498 198 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 MFAP3LO75121 409 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 GSRP00390 522 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 NUDT1P36639 197 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 ARRB1P49407 418 aaPredicted RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 NDST2P52849 883 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 BOLA3Q53S33 107 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 INO80DQ53TQ3 878 aaPredicted RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 TRIM69Q86WT6 500 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 SPATS2Q86XZ4 545 aaKnown RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 CASKIN2Q8WXE0 1202 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 BTBD6Q96KE9 485 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 CHP1Q99653 195 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 HDAC8Q9BY41 377 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 ERVMER34-1Q9H9K5 563 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 ABHD10Q9NUJ1 306 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 DONSONQ9NYP3 566 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 CWC15Q9P013 229 aaKnown RBP18.13■□□□□ 0.49
ERBB2-221ENST00000584888 IP6K2Q9UHH9 426 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
ERBB2-221ENST00000584888 LEFTY1O75610 366 aa18.12■□□□□ 0.49
ERBB2-221ENST00000584888 LDOC1O95751 146 aaPredicted RBP18.12■□□□□ 0.49
ERBB2-221ENST00000584888 ERCC2P18074 760 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms