RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 PLA2G4EQ3MJ16 856 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CLDN19Q8N6F1 224 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 LMNTD1Q8N9Z9 388 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 TRIM43Q96BQ3 446 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 NCAPGQ9BPX3 1015 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 TBL1YQ9BQ87 522 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CINPQ9BW66 212 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 ZYG11BQ9C0D3 744 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CABIN1Q9Y6J0 2220 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CNPP09543 421 aaKnown RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 TACR2P21452 398 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 IRS1P35568 1242 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 MLLT6P55198 1093 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 STX3Q13277 289 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 PDE1CQ14123 709 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 TMEM198Q66K66 360 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 FAM171BQ6P995 826 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 ATP6V0D2Q8N8Y2 350 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 WFDC5Q8TCV5 224 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 CYB5D2Q8WUJ1 264 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 SLC44A1Q8WWI5 657 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 NXNL1Q96CM4 212 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 ZNF317Q96PQ6 595 aaPredicted RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 C17orf80Q9BSJ5 609 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 LINC00597Q9H2U6 94 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 FBXO44Q9H4M3 255 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 GLOD4Q9HC38 313 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 SNX15Q9NRS6 342 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 MRPL17Q9NRX2 175 aaKnown RBP10.42□□□□□ -0.74
RFFL-212ENST00000584655 SH3BP1Q9Y3L3 701 aa10.42□□□□□ -0.74
RFFL-212ENST00000584655 DICER1Q9UPY3 1922 aaKnown RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 UNCXA6NJT0 531 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 NEDD8-MDP1E9PL57 170 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 PIGNO95427 931 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 C2P06681 752 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 CD1EP15812 388 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 UGT1A6P19224 532 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 CHRM3P20309 590 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 UGT1A1P22309 533 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 UGT1A4P22310 534 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 UGT1A3P35503 534 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 UGT1A5P35504 534 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 TCEAL1Q15170 157 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ITPRIPL1Q6GPH6 555 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 BHLHA9Q7RTU4 235 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 LRRC43Q8N309 656 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 CDC26Q8NHZ8 85 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ARNTL2Q8WYA1 636 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 MCUR1Q96AQ8 359 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 IGSF21Q96ID5 467 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 VPS39Q96JC1 886 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 SLC2A13Q96QE2 648 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 TRIM55Q9BYV6 548 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 NOD2Q9HC29 1040 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 YIPF1Q9Y548 306 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 SKIP12755 728 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 EPHA3P29320 983 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ALDH3A1P30838 453 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 OXCT1P55809 520 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 MGAT5Q09328 741 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 XKR4Q5GH76 650 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 MRPL10Q7Z7H8 261 aaKnown RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 DDX53Q86TM3 631 aaKnown RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.41□□□□□ -0.74
RFFL-212ENST00000584655 RUBCNQ92622 972 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 TEKT5Q96M29 485 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ALG9Q9H6U8 611 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 LRRC40Q9H9A6 602 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 XAB2Q9HCS7 855 aaKnown RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 MARCH4Q9P2E8 410 aaPredicted RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 NUP214P35658 2090 aaPredicted RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 PLK4O00444 970 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 DPYSL4O14531 572 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 TRIM16O95361 564 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 EOMESO95936 686 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ALDOAP04075 364 aaKnown RBP10.41□□□□□ -0.74
RFFL-212ENST00000584655 C8AP07357 584 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 CLTBP09497 229 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 NR2C2P49116 596 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 ANKS3Q6ZW76 656 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 MFN1Q8IWA4 741 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 OR4K2Q8NGD2 314 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 VN1R3Q9BXE9 311 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 TRIM8Q9BZR9 551 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 PLAC1Q9HBJ0 212 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 HACD3Q9P035 362 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 WNT6Q9Y6F9 365 aa10.41□□□□□ -0.74
RFFL-212ENST00000584655 SHOX2O60902 331 aaPredicted RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 PDE5AO76074 875 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 EZRP15311 586 aaKnown RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 SLC11A2P49281 568 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 RHOAP61586 193 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 FAM151BQ6UXP7 276 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 CCDC117Q8IWD4 279 aaPredicted RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 SHKBP1Q8TBC3 707 aa10.4□□□□□ -0.74
RFFL-212ENST00000584655 CENPIQ92674 756 aaPredicted RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 ZNF334Q9HCZ1 680 aaPredicted RBP10.4□□□□□ -0.74
RFFL-212ENST00000584655 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms