RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 NEK5Q6P3R8 708 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 RFX8Q6ZV50 586 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 NETO2Q8NC67 525 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 KLK6Q92876 244 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 CELF6Q96J87 481 aaKnown RBP20.76■□□□□ 0.91
SS18-224ENST00000584083 BTBD6Q96KE9 485 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 LRRC19Q9H756 370 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 ZWILCHQ9H900 591 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 IP6K2Q9UHH9 426 aa20.76■□□□□ 0.91
SS18-224ENST00000584083 A0A1W2PR77 199 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 ARHGAP42A6NI28 874 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 SLC31A1O15431 190 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 IGSF6O95976 241 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 ERCC2P18074 760 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 PMLP29590 882 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 ZNF135P52742 658 aaPredicted RBP20.75■□□□□ 0.91
SS18-224ENST00000584083 RHOAP61586 193 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 RAD51Q06609 339 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 FOXC1Q12948 553 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 STAT4Q14765 748 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 SUZ12Q15022 739 aaKnown RBP20.75■□□□□ 0.91
SS18-224ENST00000584083 SMTNL2Q2TAL5 461 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 BOLA3Q53S33 107 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 HSPH1Q92598 858 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 ARHGEF26Q96DR7 871 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 LRIG1Q96JA1 1093 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 GDAP1L1Q96MZ0 367 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 DEF6Q9H4E7 631 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 UBA2Q9UBT2 640 aaPredicted RBP20.75■□□□□ 0.91
SS18-224ENST00000584083 PCDHGB2Q9Y5G2 931 aa20.75■□□□□ 0.91
SS18-224ENST00000584083 PRAMEF26H0Y7S4 382 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 H3BRJ5 948 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 TLR4O00206 839 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 DFNA5O60443 496 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 UGT2B4P06133 528 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 ADRB3P13945 408 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 PRLRP16471 622 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 IL1R2P27930 398 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 SSR1P43307 286 aaKnown RBP20.74■□□□□ 0.91
SS18-224ENST00000584083 CCT8P50990 548 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 PAPOLAP51003 745 aaKnown RBP20.74■□□□□ 0.91
SS18-224ENST00000584083 FAM193AP78312 1265 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 TRIP6Q15654 476 aaKnown RBP20.74■□□□□ 0.91
SS18-224ENST00000584083 ZNF423Q2M1K9 1284 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 ZNF805Q5CZA5 627 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 PRAMEF14Q5SWL7 426 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 PARS2Q7L3T8 475 aaKnown RBP20.74■□□□□ 0.91
SS18-224ENST00000584083 HORMAD1Q86X24 394 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 VSTM4Q8IW00 320 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 MFSD2AQ8NA29 543 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 DNAJC7Q99615 494 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 MYOCQ99972 504 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 OSBPL1AQ9BXW6 950 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 SLC39A8Q9C0K1 460 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 GDF3Q9NR23 364 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 CWC15Q9P013 229 aaKnown RBP20.74■□□□□ 0.91
SS18-224ENST00000584083 ANGPTL2Q9UKU9 493 aa20.74■□□□□ 0.91
SS18-224ENST00000584083 J3KR12 359 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 MYO1FO00160 1098 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 TCF4P15884 667 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 ARL4AP40617 200 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 HCAR3P49019 387 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 IL9RQ01113 521 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 ZNF284Q2VY69 593 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 NIPA2Q8N8Q9 360 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 KLHL32Q96NJ5 620 aa20.73■□□□□ 0.91
SS18-224ENST00000584083 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.73■□□□□ 0.91
SS18-224ENST00000584083 C16orf96A6NNT2 1141 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 DFFAO00273 331 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 NEMP1O14524 444 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 FLRT2O43155 660 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 AKR1B10O60218 316 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 MAGEC1O60732 1142 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 PRAMEF11O60813 436 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 RARAP10276 462 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 MAPK8IP2Q13387 824 aaPredicted RBP20.72■□□□□ 0.91
SS18-224ENST00000584083 CYTH1Q15438 398 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 DPYSL2Q16555 572 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 SLC18A3Q16572 532 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 SEL1L3Q68CR1 1132 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 GDPD4Q6W3E5 623 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 ZNF564Q8TBZ8 553 aaPredicted RBP20.72■□□□□ 0.91
SS18-224ENST00000584083 RHBDD1Q8TEB9 315 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 CTNNBL1Q8WYA6 563 aaPredicted RBP20.72■□□□□ 0.91
SS18-224ENST00000584083 FEM1CQ96JP0 617 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 EXOC2Q96KP1 924 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 ELF4Q99607 663 aaPredicted RBP20.72■□□□□ 0.91
SS18-224ENST00000584083 PDFQ9HBH1 243 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 CTTNBP2NLQ9P2B4 639 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 LHX3Q9UBR4 397 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 PCOLCE2Q9UKZ9 415 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 NENFQ9UMX5 172 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 ZFR2Q9UPR6 939 aaKnown RBP20.72■□□□□ 0.91
SS18-224ENST00000584083 CA5BQ9Y2D0 317 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 FADS3Q9Y5Q0 445 aa20.72■□□□□ 0.91
SS18-224ENST00000584083 A0A1B0GTQ1 180 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 AKT2P31751 481 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 ADKP55263 362 aaKnown RBP20.71■□□□□ 0.91
SS18-224ENST00000584083 NXPH1P58417 271 aa20.71■□□□□ 0.91
SS18-224ENST00000584083 RPS21P63220 83 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms