RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
SREBF1-221ENST00000583080 RBM44Q6ZP01 1051 aaKnown RBP16.46■□□□□ 0.23
SREBF1-221ENST00000583080 SLC47A2Q86VL8 602 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 FEM1CQ96JP0 617 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 HEPHQ9BQS7 1158 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 TM6SF2Q9BZW4 377 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 ZDHHC6Q9H6R6 413 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 ATP13A1Q9HD20 1204 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
SREBF1-221ENST00000583080 IPO11Q9UI26 975 aaKnown RBP16.46■□□□□ 0.23
SREBF1-221ENST00000583080 CSNK1G3Q9Y6M4 447 aa16.46■□□□□ 0.23
SREBF1-221ENST00000583080 IGLON5A6NGN9 336 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 K7ENP7 123 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 FPGTO14772 594 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 AP1G1O43747 822 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 GCATO75600 419 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 CD160O95971 181 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 GKP32189 559 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 DEUP1Q05D60 604 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 NR0B2Q15466 257 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 CARD16Q5EG05 197 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 INO80CQ6PI98 192 aaPredicted RBP16.45■□□□□ 0.22
SREBF1-221ENST00000583080 SLC35F3Q8IY50 421 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 PCDH20Q8N6Y1 951 aaKnown RBP16.45■□□□□ 0.22
SREBF1-221ENST00000583080 OR6K2Q8NGY2 324 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 BOCQ9BWV1 1114 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 C1QTNF2Q9BXJ5 285 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 CEP44Q9C0F1 390 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 SALL4Q9UJQ4 1053 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 STAP1Q9ULZ2 295 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 PCDHGA8Q9Y5G5 932 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 PIEZO2Q9H5I5 2752 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 HECTD1Q9ULT8 2610 aa16.45■□□□□ 0.22
SREBF1-221ENST00000583080 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 SRGAP2O75044 1071 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 CLCN1P35523 988 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 PFN3P60673 137 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 CLN3Q13286 438 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 C1orf61Q13536 156 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 TRNP1Q6NT89 227 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 RETSATQ6NUM9 610 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 LRRC31Q6UY01 552 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 DRC7Q8IY82 874 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 ELOA2Q8IYF1 753 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-221ENST00000583080 VOPP1Q96AW1 172 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 PGAP3Q96FM1 320 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-221ENST00000583080 MED8Q96G25 268 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 FAM81BQ96LP2 452 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 IL12RB2Q99665 862 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 LRRC61Q9BV99 259 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 SYNDIG1Q9H7V2 258 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 SIX2Q9NPC8 291 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 RRN3Q9NYV6 651 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 NCKIPSDQ9NZQ3 722 aa16.44■□□□□ 0.22
SREBF1-221ENST00000583080 APOBEC3BQ9UH17 382 aaKnown RBP16.44■□□□□ 0.22
SREBF1-221ENST00000583080 TPP1O14773 563 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 SLC28A2O43868 658 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 TCEA3O75764 348 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 CELA2BP08218 269 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-221ENST00000583080 PON1P27169 355 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 KRT9P35527 623 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 IGFALSP35858 605 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 FLT3P36888 993 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 ACVRL1P37023 503 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 GNA12Q03113 381 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 PTK2Q05397 1052 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 SGCGQ13326 291 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 C2CD6Q53TS8 623 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 PRRT3Q5FWE3 981 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 LRRC73Q5JTD7 316 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 ZNF783Q6ZMS7 281 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 GBP6Q6ZN66 633 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 CLEC14AQ86T13 490 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 PHACTR4Q8IZ21 702 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 GRAMD1AQ96CP6 724 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 C1orf74Q96LT6 269 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 LENG8Q96PV6 779 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-221ENST00000583080 CLMPQ9H6B4 373 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 HECAQ9UBI9 543 aaPredicted RBP16.43■□□□□ 0.22
SREBF1-221ENST00000583080 SPASTQ9UBP0 616 aa16.43■□□□□ 0.22
SREBF1-221ENST00000583080 C16orf96A6NNT2 1141 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 TNFSF15O95150 251 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 ADKP55263 362 aaKnown RBP16.42■□□□□ 0.22
SREBF1-221ENST00000583080 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 ZSCAN23Q3MJ62 389 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 SLC25A52Q3SY17 297 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 C6orf132Q5T0Z8 1188 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 FAM102AQ5T9C2 384 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-221ENST00000583080 CCDC81Q6ZN84 652 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 FAM131BQ86XD5 332 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 XYLT1Q86Y38 959 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 ZDHHC17Q8IUH5 632 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 RYBPQ8N488 228 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-221ENST00000583080 DENND6BQ8NEG7 585 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 TPCN2Q8NHX9 752 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 WDR36Q8NI36 951 aaKnown RBP16.42■□□□□ 0.22
SREBF1-221ENST00000583080 CCDC3Q9BQI4 270 aa16.42■□□□□ 0.22
SREBF1-221ENST00000583080 ZYG11BQ9C0D3 744 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms