RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SLC30A4O14863 429 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 PLRG1O43660 514 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 PALMO75781 387 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 LCA5LO95447 670 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 POP4O95707 220 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 SYPP08247 313 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 CD27P26842 260 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 CDC25BP30305 580 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 SERPINB6P35237 376 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 NEK3P51956 506 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 LIMK1P53667 647 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 RAD51Q06609 339 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 DPYSL3Q14195 570 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 PDK2Q15119 407 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 CYTH1Q15438 398 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 MYLK3Q32MK0 819 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 PIP5KL1Q5T9C9 394 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 ARHGAP36Q6ZRI8 547 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 ERN2Q76MJ5 926 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 MAP7D3Q8IWC1 876 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 TP53INP2Q8IXH6 220 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 TSC1Q92574 1164 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 FAM131CQ96AQ9 280 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 RTKNQ9BST9 563 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 CINPQ9BW66 212 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 KDM4CQ9H3R0 1056 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 DLL3Q9NYJ7 618 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 IPO11Q9UI26 975 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 EPN1Q9Y6I3 576 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 SLCO1B1Q9Y6L6 691 aa12.8□□□□□ -0.36
SMARCE1-218ENST00000582955 PI4KAP42356 2102 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 A0A1W2PPC4 97 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 GOLGA6L6A8MZA4 724 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ARHGAP33O14559 1287 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 SPOPO43791 374 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 NDUFA10O95299 355 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 UGT2B4P06133 528 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 TNNT1P13805 278 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 FECHP22830 423 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ITGB7P26010 798 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 MAT2AP31153 395 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 CCR5P51681 352 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ARSEP51690 589 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 AFF3P51826 1226 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 TAS2R38P59533 333 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 PPP2CBP62714 309 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 PPP2CAP67775 309 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 IL10RBQ08334 325 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 TEAD4Q15561 434 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 UAP1L1Q3KQV9 507 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 FBXL19Q6PCT2 694 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ADAT2Q7Z6V5 191 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ATPAF2Q8N5M1 289 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 OSBPL1AQ9BXW6 950 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 HDAC8Q9BY41 377 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 PREBQ9HCU5 417 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 TM9SF3Q9HD45 589 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 IMPACTQ9P2X3 320 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 LHX3Q9UBR4 397 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 HYOU1Q9Y4L1 999 aa12.79□□□□□ -0.36
SMARCE1-218ENST00000582955 DCDC2BA2VCK2 349 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 LRRD1A4D1F6 860 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 CDX4O14627 284 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 INSIG1O15503 277 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 RNGTTO60942 597 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 PCDH8O95206 1070 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 KRT1P04264 644 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ADRB3P13945 408 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 IL4RP24394 825 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC1A1P43005 524 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 CSNK1EP49674 416 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 GRIK2Q13002 908 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 TCEAL1Q15170 157 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ODF2Q5BJF6 829 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ANKRD20A8PQ5CZ79 823 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 TMCO4Q5TGY1 634 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 LAYNQ6UX15 382 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 GDPD4Q6W3E5 623 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 RAD9BQ6WBX8 426 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 PARS2Q7L3T8 475 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 PRPF39Q86UA1 669 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 MINDY1Q8N5J2 469 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 TSEN2Q8NCE0 465 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 OR2I1PQ8NGU4 316 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 PCDH19Q8TAB3 1148 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 C1orf216Q8TAB5 229 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 RAPGEF5Q92565 580 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 SERAC1Q96JX3 654 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 SLC6A18Q96N87 628 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 KLHL32Q96NJ5 620 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 BAG1Q99933 345 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 ORAI3Q9BRQ5 295 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 AASDHPPTQ9NRN7 309 aa12.78□□□□□ -0.36
SMARCE1-218ENST00000582955 TPX2Q9ULW0 747 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms