RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 TRIM14Q14142 442 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 PIGHQ14442 188 aaPredicted RBP19.82■□□□□ 0.76
SREBF1-220ENST00000581707 SUZ12Q15022 739 aaKnown RBP19.82■□□□□ 0.76
SREBF1-220ENST00000581707 MYLK3Q32MK0 819 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 FBXL19Q6PCT2 694 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 RFX8Q6ZV50 586 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 LRIG1Q96JA1 1093 aa19.82■□□□□ 0.76
SREBF1-220ENST00000581707 PRAMEF26H0Y7S4 382 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 TLR4O00206 839 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ADRB3P13945 408 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 EIF4A3P38919 411 aaKnown RBP19.81■□□□□ 0.76
SREBF1-220ENST00000581707 HCAR3P49019 387 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ZNF135P52742 658 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-220ENST00000581707 SHC2P98077 582 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 STAT4Q14765 748 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 TRIP6Q15654 476 aaKnown RBP19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ZNF284Q2VY69 593 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 BOLA3Q53S33 107 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ZNF805Q5CZA5 627 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ATXN7L2Q5T6C5 722 aaPredicted RBP19.81■□□□□ 0.76
SREBF1-220ENST00000581707 DBX2Q6ZNG2 339 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 HORMAD1Q86X24 394 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 MFSD2AQ8NA29 543 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 OR8K1Q8NGG5 319 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 KLK6Q92876 244 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 CELF6Q96J87 481 aaKnown RBP19.81■□□□□ 0.76
SREBF1-220ENST00000581707 GDAP1L1Q96MZ0 367 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 NUP85Q9BW27 656 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 IP6K2Q9UHH9 426 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ANAPC7Q9UJX3 599 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 TRPM6Q9BX84 2022 aa19.81■□□□□ 0.76
SREBF1-220ENST00000581707 ARHGAP42A6NI28 874 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 SLC31A1O15431 190 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 FLRT2O43155 660 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 ERCC2P18074 760 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 IL1R2P27930 398 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 CCT8P50990 548 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 RHOAP61586 193 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 RAD51Q06609 339 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 FOXC1Q12948 553 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 PARS2Q7L3T8 475 aaKnown RBP19.8■□□□□ 0.76
SREBF1-220ENST00000581707 IQCHQ86VS3 1027 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 NIPA2Q8N8Q9 360 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 NETO2Q8NC67 525 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 ARHGEF26Q96DR7 871 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 BTBD6Q96KE9 485 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 ELF4Q99607 663 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-220ENST00000581707 DNAJC7Q99615 494 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 OSBPL1AQ9BXW6 950 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 SLC39A8Q9C0K1 460 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 ZWILCHQ9H900 591 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 GDF3Q9NR23 364 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 CWC15Q9P013 229 aaKnown RBP19.8■□□□□ 0.76
SREBF1-220ENST00000581707 UBA2Q9UBT2 640 aaPredicted RBP19.8■□□□□ 0.76
SREBF1-220ENST00000581707 PCOLCE2Q9UKZ9 415 aa19.8■□□□□ 0.76
SREBF1-220ENST00000581707 C16orf96A6NNT2 1141 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 J3KR12 359 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 PCDHGA12O60330 932 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 PRAMEF11O60813 436 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 CBFA2T3O75081 653 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 IGSF6O95976 241 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 UGT2B4P06133 528 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 TPM1P09493 284 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 TCF4P15884 667 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 PRLRP16471 622 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 PAPOLAP51003 745 aaKnown RBP19.79■□□□□ 0.76
SREBF1-220ENST00000581707 NXPH1P58417 271 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 OVGP1Q12889 678 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 CYTH1Q15438 398 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 TSR1Q2NL82 804 aaKnown RBP19.79■□□□□ 0.76
SREBF1-220ENST00000581707 SMTNL2Q2TAL5 461 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 PRAMEF14Q5SWL7 426 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 VSTM4Q8IW00 320 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 RHBDD1Q8TEB9 315 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 HSPH1Q92598 858 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 FEM1CQ96JP0 617 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 ZNHIT6Q9NWK9 470 aaKnown RBP19.79■□□□□ 0.76
SREBF1-220ENST00000581707 NENFQ9UMX5 172 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 ZFR2Q9UPR6 939 aaKnown RBP19.79■□□□□ 0.76
SREBF1-220ENST00000581707 FADS3Q9Y5Q0 445 aa19.79■□□□□ 0.76
SREBF1-220ENST00000581707 A0A1B0GTQ1 180 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 H3BRJ5 948 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 MYO1FO00160 1098 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 AP1G1O43747 822 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 MAGEC1O60732 1142 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 RPS21P63220 83 aaKnown RBP19.78■□□□□ 0.76
SREBF1-220ENST00000581707 IL9RQ01113 521 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 DPYSQ14117 519 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 DPYSL2Q16555 572 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 SLC18A3Q16572 532 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 AFMIDQ63HM1 303 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 SEL1L3Q68CR1 1132 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 GDPD4Q6W3E5 623 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 ARHGAP12Q8IWW6 846 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 RAB7BQ96AH8 199 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 VOPP1Q96AW1 172 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 KLHL32Q96NJ5 620 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 CNTNAP3BQ96NU0 1288 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 CNTNAP3Q9BZ76 1288 aa19.78■□□□□ 0.76
SREBF1-220ENST00000581707 PDFQ9HBH1 243 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms