RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 APOLD1Q96LR9 279 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 TBATAQ96M53 351 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 POLR3GLQ9BT43 218 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 TTYH1Q9H313 450 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 HIF1ANQ9NWT6 349 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 IL1RAPL1Q9NZN1 696 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 PEMTQ9UBM1 199 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 SLC13A4Q9UKG4 626 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 TBX20Q9UMR3 447 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 CRYL1Q9Y2S2 319 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 PCDHGB5Q9Y5G0 923 aa4.82□□□□□ -1.64
SMCHD1-204ENST00000581226 PABPN1LA6NDY0 278 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 TEX22C9J3V5 150 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 SPTLC2O15270 562 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 RFX2P48378 723 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 BLKP51451 505 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 PGGT1BP53609 377 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 PMS2P54278 862 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 RPP30P78346 268 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 CAMK1Q14012 370 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 FNBP1LQ5T0N5 605 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 NAA35Q5VZE5 725 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 ATG9BQ674R7 924 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 MOB3CQ70IA8 216 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 RBFAQ8N0V3 343 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 PELI3Q8N2H9 469 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 ZMIZ2Q8NF64 920 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 TBC1D22AQ8WUA7 517 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 TMEM170AQ8WVE7 144 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 TMEM18Q96B42 140 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 ZBTB10Q96DT7 871 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 APOPT1Q96IL0 206 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 CAMK1GQ96NX5 476 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 EIF2AK1Q9BQI3 630 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 SF3B5Q9BWJ5 86 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 EBF3Q9H4W6 596 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 MVB12BQ9H7P6 319 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 MRPL44Q9H9J2 332 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 WASH6PQ9NQA3 447 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 BABAM1Q9NWV8 329 aa4.81□□□□□ -1.64
SMCHD1-204ENST00000581226 A0A1B0GVT2 93 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 SPRY3O43610 288 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 LIASO43766 372 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 AGR2O95994 175 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 LCATP04180 440 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 URODP06132 367 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 SNHG28P0DPA3 235 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 CTPS1P17812 591 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 GGT5P36269 586 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 LIFRP42702 1097 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 RFX5P48382 616 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 CENPAP49450 140 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 TUBP50607 506 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 YWHAZP63104 245 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 EFNB1P98172 346 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 ROR2Q01974 943 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 GALNT2Q10471 571 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 CAPSQ13938 189 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 FSCBQ5H9T9 825 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 DNTTIP2Q5QJE6 756 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 Q6ZSV7 163 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 HEATR4Q86WZ0 1026 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 LURAP1LQ8IV03 231 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 TEX45Q8NA69 505 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 MCPH1Q8NEM0 835 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 ZCCHC10Q8TBK6 192 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 TMEM163Q8TC26 289 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 OIT3Q8WWZ8 545 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 RNF183Q96D59 192 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 NAF1Q96HR8 494 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 YME1L1Q96TA2 773 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 FUZQ9BT04 418 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 NPFFR1Q9GZQ6 430 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 SPATS2LQ9NUQ6 558 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 BEX4Q9NWD9 120 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 HCN3Q9P1Z3 774 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 SRPRBQ9Y5M8 271 aaKnown RBP4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 PTGDR2Q9Y5Y4 395 aa4.8□□□□□ -1.64
SMCHD1-204ENST00000581226 ADGRF5Q8IZF2 1346 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 TYW5A2RUC4 315 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 OR6C75A6NL08 312 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 TNPO2O14787 897 aaKnown RBP4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 INSIG1O15503 277 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 RGS14O43566 566 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 LDB2O43679 373 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 ALPLP05186 524 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 GNLYP22749 145 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 ARRB2P32121 409 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 TTKP33981 857 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 THPOP40225 353 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 FOXG1P55316 489 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 CYP4A11Q02928 519 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 FHL1Q13642 323 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 PLEKHO1Q53GL0 409 aaPredicted RBP4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 ALFQ53S48 1182 aa4.79□□□□□ -1.64
SMCHD1-204ENST00000581226 ZNF667Q5HYK9 610 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms