RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 MID1O15344 667 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 RNASEH1O60930 286 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 PIAS2O75928 621 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 RTN3O95197 1032 aaPredicted RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 CYBBP04839 570 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 HMGB1P09429 215 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 PDGFRBP09619 1106 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 OR52Z1P0C646 297 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TBC1D3HP0C7X1 549 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 ITIH1P19827 911 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 RPA1P27694 616 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 SLC6A4P31645 630 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PSMD8P48556 350 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TUBP50607 506 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CCR5P51681 352 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PDX1P52945 283 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CACNA2D1P54289 1103 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 ADPRHP54922 357 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TFAMQ00059 246 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 FGL2Q14314 439 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 EIF2S3LQ2VIR3 472 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 DCAF6Q58WW2 860 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TBC1D3GQ6DHY5 549 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TBC1D3CQ6IPX1 549 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 ZCCHC8Q6NZY4 707 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 HTR3DQ70Z44 454 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TIPARPQ7Z3E1 657 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 TMPRSS9Q7Z410 1059 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 B3GNT8Q7Z7M8 397 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PRPF39Q86UA1 669 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 MMAAQ8IVH4 418 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 MCEMP1Q8IX19 187 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 SMC5Q8IY18 1101 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TBC1D3Q8IZP1 549 aaPredicted RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 SLC34A3Q8N130 599 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 DAW1Q8N136 415 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 NUP93Q8N1F7 819 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 ZNF276Q8N554 614 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TMEM161BQ8NDZ6 487 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 GRIN3AQ8TCU5 1115 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 DDI1Q8WTU0 396 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 OVCA2Q8WZ82 227 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 ELMO3Q96BJ8 720 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PPP1R13BQ96KQ4 1090 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CEP295NLQ96MC4 621 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CATSPER2Q96P56 530 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 DUSP9Q99956 384 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 SLC12A9Q9BXP2 914 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CALN1Q9BXU9 219 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 NEUROG2Q9H2A3 272 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TMEM245Q9H330 911 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 MTG2Q9H4K7 406 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PREBQ9HCU5 417 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 BRMS1Q9HCU9 246 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CRTAC1Q9NQ79 661 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PRSS16Q9NQE7 514 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 PRDM8Q9NQV8 689 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 GJB4Q9NTQ9 266 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 DDX19AQ9NUU7 478 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 DNAJC28Q9NX36 388 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 FOXJ2Q9P0K8 574 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 GGT7Q9UJ14 662 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CPSF3Q9UKF6 684 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 ACSL6Q9UKU0 697 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 CDH9Q9ULB4 789 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 SCML1Q9UN30 329 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 AGAP1Q9UPQ3 857 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 R3HCC1Q9Y3T6 440 aaKnown RBP4.63□□□□□ -1.67
RTTN-205ENST00000580034 LOXL2Q9Y4K0 774 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 U3KQA8 63 aa4.63□□□□□ -1.67
RTTN-205ENST00000580034 TNRC6AQ8NDV7 1962 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 CROCCQ5TZA2 2017 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 ZNF891A8MT65 544 aaPredicted RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 K7ENM7 598 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 MDM4O15151 490 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 NVLO15381 856 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 FAM189A1O60320 539 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 CPNE3O75131 537 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 CLSTN1O94985 981 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 LUC7L3O95232 432 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 NADKO95544 446 aaPredicted RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 TBX18O95935 607 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 PENKP01210 267 aaPredicted RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 HMBSP08397 361 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 PLCG1P19174 1290 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 LMO2P25791 158 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 MCM7P33993 719 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 KRT2P35908 639 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 ATP5C1P36542 298 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 SLC5A3P53794 718 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 OVGP1Q12889 678 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 STK3Q13188 491 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 MRPL49Q13405 166 aaKnown RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 KRT32Q14532 448 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 CST6Q15828 149 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 DEFB133Q30KQ1 61 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 SETMARQ53H47 684 aaPredicted RBP4.62□□□□□ -1.67
RTTN-205ENST00000580034 ZNF542PQ5EBM4 170 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 NUGGCQ68CJ6 796 aa4.62□□□□□ -1.67
RTTN-205ENST00000580034 TMEM215Q68D42 235 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms