RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 XKR5Q6UX68 686 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 Q6ZS52 159 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TPRG1Q6ZUI0 275 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 RSRC2Q7L4I2 434 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TADA2BQ86TJ2 420 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ADIPOR2Q86V24 386 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 VPS36Q86VN1 386 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 RALGPS2Q86X27 583 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CIR1Q86X95 450 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGAP12Q8IWW6 846 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 UNC45BQ8IWX7 931 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 RHOT2Q8IXI1 618 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MAML2Q8IZL2 1156 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 NPWQ8N729 165 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM105Q8N8V8 129 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TERB1Q8NA31 727 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MSANTD4Q8NCY6 345 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC112Q8NEF3 446 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PJA1Q8NG27 643 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TEKT4Q8WW24 435 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CTNNBL1Q8WYA6 563 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 KRT35Q92764 455 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ATP2A3Q93084 1043 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MSANTD3Q96H12 275 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF419Q96HQ0 510 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MRGPRX3Q96LB0 322 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 HAPLN3Q96S86 360 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PSMB7Q99436 277 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 FOXQ1Q9C009 403 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 DCLK3Q9C098 648 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TKTL2Q9H0I9 626 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SYNCQ9H7C4 482 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 BRD9Q9H8M2 597 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PCDH18Q9HCL0 1135 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MRPL47Q9HD33 250 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 LTB4R2Q9NPC1 389 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ARHGEF3Q9NR81 526 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SEMA3GQ9NS98 782 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 KCND1Q9NSA2 647 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ETNK2Q9NVF9 386 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNHIT6Q9NWK9 470 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 GPATCH2LQ9NWQ4 482 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TBC1D14Q9P2M4 693 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MYO1AQ9UBC5 1043 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ANAPC7Q9UJX3 599 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 CA14Q9ULX7 337 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PYCARDQ9ULZ3 195 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF510Q9Y2H8 683 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 TBC1D30Q9Y2I9 924 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 SH3BP1Q9Y3L3 701 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MFHAS1Q9Y4C4 1052 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 HYOU1Q9Y4L1 999 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 KCTD3Q9Y597 815 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 PIAS3Q9Y6X2 628 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 MYO15AQ9UKN7 3530 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 BPTFQ12830 3046 aa3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 COL27A1Q8IZC6 1860 aaPredicted RBP3.9□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF292O60281 2723 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SYNJ2BP-COX16A0A087WUM0 186 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 A0A1B0GVM2 712 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 KANSL1LA0AUZ9 987 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TMEM221A6NGB7 291 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF487B1APH4 448 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CHURC1-FNTBB4DL54 471 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 E9PAM4 449 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 NEDD8-MDP1E9PL57 170 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 M0R296 226 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 RNF103O00237 685 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC9A3R1O14745 358 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CAPN9O14815 690 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TSPAN3O60637 253 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SEMA7AO75326 666 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 ZNF821O75541 412 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LUC7L3O95232 432 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 NFATC1O95644 943 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 MOCS2O96007 188 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PEX11BO96011 259 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 EGFP01133 1207 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 APOEP02649 317 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 TPM1P09493 284 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC2A3P11169 496 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 AOC1P19801 751 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 COMTP21964 271 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CTNNA2P26232 953 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 MZF1P28698 734 aaPredicted RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CTNNA1P35221 906 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CHKAP35790 457 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 HCAR3P49019 387 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 SLC11A2P49281 568 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 HARS2P49590 506 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 GALK1P51570 392 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 AIF1P55008 147 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PFKPQ01813 784 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 PLP2Q04941 152 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 GAD2Q05329 585 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 CCDC173Q0VFZ6 552 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 LMAN2Q12907 356 aa3.89□□□□□ -1.79
SMARCE1-215ENST00000578995 DPYSL3Q14195 570 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms