RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ADH1CP00326 375 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 SERPINF2P08697 491 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 HLA-FP30511 346 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 EML3Q32P44 896 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 AGBL2Q5U5Z8 902 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 LINGO4Q6UY18 593 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 RANBP10Q6VN20 620 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 GSDMBQ8TAX9 411 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 EPS8L3Q8TE67 593 aaKnown RBP18.81■□□□□ 0.6
PRKCA-203ENST00000578063 ARL8AQ96BM9 186 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 PGM2Q96G03 612 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 CENPHQ9H3R5 247 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 ABCB8Q9NUT2 735 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 MTCH2Q9Y6C9 303 aa18.81■□□□□ 0.6
PRKCA-203ENST00000578063 TCRBV9S1A1TA0A576 114 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 MAGEB16A2A368 324 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 HMGB1P1B2RPK0 211 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 AGTP01019 485 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 CR2P20023 1033 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 POU3F3P20264 500 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 SERPINH1P50454 418 aaKnown RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 SLC20A2Q08357 652 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 DMC1Q14565 340 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 DHCR24Q15392 516 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 LONRF1Q17RB8 773 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 TTMPQ5BVD1 217 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 PITRM1Q5JRX3 1037 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 ARMC3Q5W041 872 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 STEAP4Q687X5 459 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 UNC5AQ6ZN44 842 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 EP400NLQ6ZTU2 488 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 RIBC1Q8N443 379 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 FBF1Q8TES7 1133 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 ATP6V1G3Q96LB4 118 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 XPO6Q96QU8 1125 aaKnown RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 TTYH1Q9H313 450 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 ARNT2Q9HBZ2 717 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 THG1LQ9NWX6 298 aaKnown RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 CLDND1Q9NY35 253 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 RABGEF1Q9UJ41 708 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 GGA2Q9UJY4 613 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 SMIM23A6NLE4 172 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 HEPACAM2A8MVW5 462 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 HOXC11O43248 304 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 CDH16O75309 829 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 NFATC1O95644 943 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 CYP17A1P05093 508 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 PABPC1P11940 636 aaKnown RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 FCARP24071 287 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 MTHFRP42898 656 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 NSUN2Q08J23 767 aaKnown RBP eCLIP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 PCSK7Q16549 785 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 RALGPS1Q5JS13 557 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 NUDCD1Q96RS6 583 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 CYTH2Q99418 400 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 STMN4Q9H169 189 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 ZFP14Q9HCL3 533 aa18.8■□□□□ 0.6
PRKCA-203ENST00000578063 INTS6Q9UL03 887 aaKnown RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 COLQQ9Y215 455 aaPredicted RBP18.8■□□□□ 0.6
PRKCA-203ENST00000578063 RGS16O15492 202 aaPredicted RBP18.79■□□□□ 0.6
PRKCA-203ENST00000578063 INSIG1O15503 277 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 EPOP01588 193 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 ADH5P11766 374 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 SLCO1A2P46721 670 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 CRADDP78560 199 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 GRIN2CQ14957 1233 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 COL19A1Q14993 1142 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 PDGFRLQ15198 375 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 DENND5AQ6IQ26 1287 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 CYS1Q717R9 158 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 TDRPQ86YL5 185 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 ATP2A3Q93084 1043 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 FEM1CQ96JP0 617 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 PLAC1Q9HBJ0 212 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 SCUBE2Q9NQ36 999 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 LHX3Q9UBR4 397 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 SLC24A2Q9UI40 661 aa18.79■□□□□ 0.6
PRKCA-203ENST00000578063 POLBP06746 335 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 RGRP47804 291 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 SCNN1BP51168 640 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 RHOAP61586 193 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 SULT2A1Q06520 285 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
PRKCA-203ENST00000578063 RASA2Q15283 850 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 FUT11Q495W5 492 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 SPANXN3Q5MJ09 141 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 PTCD2Q8WV60 388 aaKnown RBP18.78■□□□□ 0.6
PRKCA-203ENST00000578063 IFT43Q96FT9 208 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 NOD2Q9HC29 1040 aa18.78■□□□□ 0.6
PRKCA-203ENST00000578063 FAM237BA0A1B0GVD1 139 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 LOC285095A0A1B0GVY8 99 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 TTC24A2A3L6 582 aaPredicted RBP18.77■□□□□ 0.6
PRKCA-203ENST00000578063 ATP9BO43861 1147 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 HLA-DPA1P20036 260 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 IGFBP4P22692 258 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 PRKCHP24723 683 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 CDK18Q07002 472 aa18.77■□□□□ 0.6
PRKCA-203ENST00000578063 IHHQ14623 411 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms