RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 UBLCP1Q8WVY7 318 aaPredicted RBP12.63□□□□□ -0.39
TSEN54-204ENST00000577197 FGF14Q92915 247 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 TTC17Q96AE7 1141 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 RSPRY1Q96DX4 576 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 OXNAD1Q96HP4 312 aaPredicted RBP12.63□□□□□ -0.39
TSEN54-204ENST00000577197 FEM1CQ96JP0 617 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 SIGLEC10Q96LC7 697 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 ASB2Q96Q27 587 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 NUDCD1Q96RS6 583 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 MRM3Q9HC36 420 aaKnown RBP12.63□□□□□ -0.39
TSEN54-204ENST00000577197 SAYSD1Q9NPB0 183 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 NINJ2Q9NZG7 142 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 BFARQ9NZS9 450 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 VPS51Q9UID3 782 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
TSEN54-204ENST00000577197 LOC285095A0A1B0GVY8 99 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 CBX4O00257 560 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 CD160O95971 181 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 CYP17A1P05093 508 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 PABPC1P11940 636 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 HLA-DPA1P20036 260 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 SP100P23497 879 aaPredicted RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 MZF1P28698 734 aaPredicted RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 HLA-FP30511 346 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 ZP2Q05996 745 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 SLC29A2Q14542 456 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 PITRM1Q5JRX3 1037 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 FNBP1LQ5T0N5 605 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 STEAP4Q687X5 459 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 VITQ6UXI7 678 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 TPGS1Q6ZTW0 290 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 PRPF39Q86UA1 669 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 TDRPQ86YL5 185 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 ETFBKMTQ8IXQ9 262 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 YAF2Q8IY57 180 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 CPA6Q8N4T0 437 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 NETO2Q8NC67 525 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 WFDC5Q8TCV5 224 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 RANBP9Q96S59 729 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 SRPK1Q96SB4 655 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 EBNA1BP2Q99848 306 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 TBL1YQ9BQ87 522 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 SPON2Q9BUD6 331 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 FSD1LQ9BXM9 530 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 NT5MQ9NPB1 228 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 TRPV5Q9NQA5 729 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 GGA2Q9UJY4 613 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 RIMKLBQ9ULI2 386 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 RPL26L1Q9UNX3 145 aaKnown RBP12.62□□□□□ -0.39
TSEN54-204ENST00000577197 WNT6Q9Y6F9 365 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 NUMBLQ9Y6R0 609 aa12.62□□□□□ -0.39
TSEN54-204ENST00000577197 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.61□□□□□ -0.39
TSEN54-204ENST00000577197 FAM237BA0A1B0GVD1 139 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 A0A1W2PQ67 120 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 C19orf67A6NJJ6 358 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 INSIG1O15503 277 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 TMCC1O94876 653 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 GSRP00390 522 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 FGF1P05230 155 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 SRPRAP08240 638 aaKnown RBP12.61□□□□□ -0.39
TSEN54-204ENST00000577197 MMP2P08253 660 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 BMP1P13497 986 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 PGAM1P18669 254 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 STX2P32856 288 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 SKOR1P84550 965 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 NAB1Q13506 487 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 HSP90B2PQ58FF3 399 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 FAXCQ5TGI0 409 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 NLRP9Q7RTR0 991 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 PCDH20Q8N6Y1 951 aaKnown RBP12.61□□□□□ -0.39
TSEN54-204ENST00000577197 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 PGM2Q96G03 612 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 MRGPRX2Q96LB1 330 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 GDAP1L1Q96MZ0 367 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LRRC3BQ96PB8 259 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 ZIM3Q96PE6 472 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 TUBGCP5Q96RT8 1024 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 TRMT61BQ9BVS5 477 aaKnown RBP12.61□□□□□ -0.39
TSEN54-204ENST00000577197 CEP41Q9BYV8 373 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 STMN4Q9H169 189 aaPredicted RBP12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LINC00597Q9H2U6 94 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 ACSS3Q9H6R3 686 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 KCNK12Q9HB15 430 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LRRC4CQ9HCJ2 640 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 LIMD1Q9UGP4 676 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 SLC25A13Q9UJS0 675 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 PLAAQ9Y263 795 aa12.61□□□□□ -0.39
TSEN54-204ENST00000577197 GOLGA8MH3BSY2 632 aa12.6□□□□□ -0.39
TSEN54-204ENST00000577197 NPC1O15118 1278 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms