RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 RAD51Q06609 339 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 DUOXA1Q1HG43 343 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 AGBL4Q5VU57 503 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 PEAR1Q5VY43 1037 aaPredicted RBP15.93■□□□□ 0.14
NCBP3-207ENST00000577169 DAAM2Q86T65 1068 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 C12orf50Q8NA57 414 aaPredicted RBP15.93■□□□□ 0.14
NCBP3-207ENST00000577169 SNX19Q92543 992 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 VOPP1Q96AW1 172 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 LRIG1Q96JA1 1093 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 EXOC2Q96KP1 924 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 GDAP1L1Q96MZ0 367 aa15.93■□□□□ 0.14
NCBP3-207ENST00000577169 MAK16Q9BXY0 300 aaKnown RBP15.93■□□□□ 0.14
NCBP3-207ENST00000577169 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.93■□□□□ 0.14
NCBP3-207ENST00000577169 PLRG1O43660 514 aaKnown RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 MFSD11O43934 449 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 GDF9O60383 454 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 MAP3K6O95382 1288 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 IGHV4-34P06331 123 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 HOXD12P35452 270 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 RGRP47804 291 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 TAS2R38P59533 333 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 SLC10A7Q0GE19 358 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 CCDC15Q0P6D6 951 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 SLC10A2Q12908 348 aaPredicted RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 RFTN1Q14699 578 aaPredicted RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 LBRQ14739 615 aaKnown RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 TRIM61Q5EBN2 209 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 PIP5KL1Q5T9C9 394 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 C11orf63Q6NUN7 778 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 SLC23A3Q6PIS1 610 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 GDPD4Q6W3E5 623 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 ERN2Q76MJ5 926 aaKnown RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 TSEN2Q8NCE0 465 aaKnown RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 CEP76Q8TAP6 659 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 PPP1R16AQ96I34 528 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 CALR3Q96L12 384 aaKnown RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 KLHL32Q96NJ5 620 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 ZNF599Q96NL3 588 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 CINPQ9BW66 212 aaPredicted RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 HDAC8Q9BY41 377 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 KDM4CQ9H3R0 1056 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 RXFP3Q9NSD7 469 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 TRIM10Q9UDY6 481 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 SLC6A14Q9UN76 642 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 PTPRZ1P23471 2315 aaPredicted RBP15.92■□□□□ 0.14
NCBP3-207ENST00000577169 FAM186AA6NE01 2351 aa15.92■□□□□ 0.14
NCBP3-207ENST00000577169 C16orf96A6NNT2 1141 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 ZNF487B1APH4 448 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 C10orf142B7Z368 130 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 PSTPIP1O43586 416 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 FOXD2O60548 495 aaPredicted RBP15.91■□□□□ 0.14
NCBP3-207ENST00000577169 PEX11BO96011 259 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 CFIP05156 583 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 UGT2B4P06133 528 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 GNSP15586 552 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 ITGB7P26010 798 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 CCR5P51681 352 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 KIF5AQ12840 1032 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 AASDHQ4L235 1098 aaPredicted RBP15.91■□□□□ 0.14
NCBP3-207ENST00000577169 ZNF805Q5CZA5 627 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 FBXL19Q6PCT2 694 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 MFSD7Q6UXD7 560 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 SRLQ86TD4 932 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 VSIG1Q86XK7 387 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 LRRC49Q8IUZ0 686 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 LRRC8AQ8IWT6 810 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 ATPAF2Q8N5M1 289 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 C1orf216Q8TAB5 229 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 KIAA1524Q8TCG1 905 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 NUSAP1Q9BXS6 441 aaKnown RBP15.91■□□□□ 0.14
NCBP3-207ENST00000577169 CPEB1Q9BZB8 566 aaKnown RBP15.91■□□□□ 0.14
NCBP3-207ENST00000577169 EBF2Q9HAK2 575 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 FSCN3Q9NQT6 498 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 SLCO1B1Q9Y6L6 691 aa15.91■□□□□ 0.14
NCBP3-207ENST00000577169 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 SHROOM3Q8TF72 1996 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 A0A1B0GTW7 788 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 PRR5-ARHGAP8B1AHC4 643 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 MUSKO15146 869 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 BCAT2O15382 392 aaPredicted RBP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 ZRANB2O95218 330 aaKnown RBP eCLIP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 SERPINF2P08697 491 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 CD27P26842 260 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 GARSP41250 739 aaKnown RBP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 CSNK1DP48730 415 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 RENBPP51606 427 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 NEK3P51956 506 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 ARHGAP8P85298 464 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 LMNB2Q03252 620 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 GBE1Q04446 702 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 NSUN2Q08J23 767 aaKnown RBP eCLIP15.9■□□□□ 0.14
NCBP3-207ENST00000577169 GALNT2Q10471 571 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 TMCO4Q5TGY1 634 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 RABEPKQ7Z6M1 372 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 RFX6Q8HWS3 928 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 RCOR2Q8IZ40 523 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 TXLNBQ8N3L3 684 aa15.9■□□□□ 0.14
NCBP3-207ENST00000577169 ZCCHC9Q8N567 271 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms