RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 MARC1Q5VT66 337 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 PRR23BQ6ZRT6 265 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 PGBD5Q8N414 524 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 HDDC3Q8N4P3 179 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.5■□□□□ 0.23
PFN1-203ENST00000574872 AADATQ8N5Z0 425 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 CEP41Q9BYV8 373 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 IRF2BPLQ9H1B7 796 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 ITM2CQ9NQX7 267 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 FBXL12Q9NXK8 326 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 MBD1Q9UIS9 605 aaPredicted RBP16.5■□□□□ 0.23
PFN1-203ENST00000574872 EFR3BQ9Y2G0 817 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 TTLL3Q9Y4R7 772 aa16.5■□□□□ 0.23
PFN1-203ENST00000574872 VPS13AQ96RL7 3174 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 IGHV1OR15-9A0A0B4J2B8 117 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 TCRBV7S2A1N4TA0A589 114 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 APOC4-APOC2K7ER74 178 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 NEBLO76041 1014 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 PIGNO95427 931 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 APOC2P02655 101 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 UGT2B4P06133 528 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 CCNB1P14635 433 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 C5AR1P21730 350 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 CXCR5P32302 372 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 SCNN1BP51168 640 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 OTUD4Q01804 1114 aaKnown RBP16.49■□□□□ 0.23
PFN1-203ENST00000574872 FAM46CQ5VWP2 391 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
PFN1-203ENST00000574872 ADAT2Q7Z6V5 191 aaKnown RBP16.49■□□□□ 0.23
PFN1-203ENST00000574872 PLPP6Q8IY26 295 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 BBS5Q8N3I7 341 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 DEFB119Q8N690 84 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 TMIEQ8NEW7 156 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 ACTL9Q8TC94 416 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 TFB1MQ8WVM0 346 aaKnown RBP16.49■□□□□ 0.23
PFN1-203ENST00000574872 MAML1Q92585 1016 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 TOE1Q96GM8 510 aaKnown RBP16.49■□□□□ 0.23
PFN1-203ENST00000574872 PSKH2Q96QS6 385 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 OMDQ99983 421 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 C10orf88Q9H8K7 445 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 RBM22Q9NW64 420 aaKnown RBP eCLIP16.49■□□□□ 0.23
PFN1-203ENST00000574872 SDK1Q7Z5N4 2213 aa16.49■□□□□ 0.23
PFN1-203ENST00000574872 H7C0C1 242 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 MAP3K13O43283 966 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 POP4O95707 220 aaKnown RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 JCHAINP01591 159 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 ATP1A1P05023 1023 aaKnown RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 CD6P30203 668 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 CNR2P34972 360 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 ATP5OP48047 213 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 RENBPP51606 427 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 RAD51Q06609 339 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 ITKQ08881 620 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 CNTN1Q12860 1018 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 ZBTB17Q13105 803 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 BYSLQ13895 437 aaKnown RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 HNRNPDQ14103 355 aaKnown RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 SIM2Q14190 667 aaPredicted RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 PRKD1Q15139 912 aaPredicted RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 NOMO1Q15155 1222 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 SRLQ86TD4 932 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 KBTBD6Q86V97 674 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 TEX26Q8N6G2 289 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 UBE2Q2Q8WVN8 375 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 VOPP1Q96AW1 172 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 QKIQ96PU8 341 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■■■□□ 18.3
PFN1-203ENST00000574872 CARD9Q9H257 536 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 NEUROG2Q9H2A3 272 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 SCML1Q9UN30 329 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 NCKAP1Q9Y2A7 1128 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 R3HDM2Q9Y2K5 976 aaKnown RBP16.48■□□□□ 0.23
PFN1-203ENST00000574872 JRKLQ9Y4A0 524 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 NUMA1Q14980 2115 aa16.48■□□□□ 0.23
PFN1-203ENST00000574872 FANCMQ8IYD8 2048 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 CEP104O60308 925 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 HLA-DQB2P05538 268 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 C7P10643 843 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 ACSL1P33121 698 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 DRD3P35462 400 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 HSPA9P38646 679 aaKnown RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 EIF3EP60228 445 aaKnown RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 GNG11P61952 73 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 NHLH1Q02575 133 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 RPL6Q02878 288 aaKnown RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 KLF1Q13351 362 aaPredicted RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 SLC13A5Q86YT5 568 aaPredicted RBP16.47■□□□□ 0.23
PFN1-203ENST00000574872 ABCA7Q8IZY2 2146 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 NSMCE3Q96MG7 304 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 KLHL32Q96NJ5 620 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 MGME1Q9BQP7 344 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 GPR174Q9BXC1 333 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 BRD8Q9H0E9 1235 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 SCUBE2Q9NQ36 999 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 DYRK4Q9NR20 520 aa16.47■□□□□ 0.23
PFN1-203ENST00000574872 MYO15AQ9UKN7 3530 aa16.46■□□□□ 0.23
PFN1-203ENST00000574872 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.46■□□□□ 0.23
PFN1-203ENST00000574872 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms