RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 DEPDC1Q5TB30 811 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 RSBN1Q5VWQ0 802 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-212ENST00000574799 IL31Q6EBC2 164 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 GADL1Q6ZQY3 521 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 ERO1BQ86YB8 467 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 TMEM126BQ8IUX1 230 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 CDKL3Q8IVW4 592 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-212ENST00000574799 CCDC103Q8IW40 242 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 FBXO16Q8IX29 292 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-212ENST00000574799 TMEM192Q8IY95 271 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 SNX31Q8N9S9 440 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF669Q96BR6 464 aaPredicted RBP9.7□□□□□ -0.86
CCDC40-212ENST00000574799 CEP41Q9BYV8 373 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 GIMAP4Q9NUV9 329 aa9.7□□□□□ -0.86
CCDC40-212ENST00000574799 EXTL3O43909 919 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 F7P08709 466 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 NAMPTP43490 491 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 TUFMP49411 452 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PFKPQ01813 784 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF846Q147U1 533 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PITRM1Q5JRX3 1037 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CELF3Q5SZQ8 465 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 STRA8Q7Z7C7 330 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MCUQ8NE86 351 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MAPK15Q8TD08 544 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 TARS2Q9BW92 718 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 FANCEQ9HB96 536 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 OLAHQ9NV23 265 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PCDHB12Q9Y5F1 795 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SCN1AP35498 2009 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 TCRBV5S1A1TA0A578 114 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 HMGCRP04035 888 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 GNAO1P09471 354 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 HSPA1AP0DMV8 641 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 HSPA1BP0DMV9 641 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CD247P20963 164 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MGAT1P26572 445 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 GRIA1P42261 906 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF132P52740 706 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SLC12A2P55011 1212 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PIGGQ5H8A4 983 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 METTL7BQ6UX53 244 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 C14orf80Q86SX3 495 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CLEC4FQ8N1N0 589 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 LZTR1Q8N653 840 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 NAT16Q8N8M0 369 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MCPH1Q8NEM0 835 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ACMSDQ8TDX5 336 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CHPT1Q8WUD6 406 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 GLMNQ92990 594 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SDCCAG3Q96C92 435 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 LRRC39Q96DD0 335 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 VTA1Q9NP79 307 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 EGFL7Q9UHF1 273 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PCDHGC3Q9UN70 934 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ERGIC3Q9Y282 383 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 M0QYV0 167 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MRASO14807 208 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MED7O43513 233 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 AVPR1AP37288 418 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 GTF2A2P52657 109 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 YWHAEP62258 255 aaKnown RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 POU5F1BQ06416 359 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 POLD3Q15054 466 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 AMHR2Q16671 573 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF699Q32M78 642 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF362Q5T0B9 420 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 MAVSQ7Z434 540 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SNX29P2Q8IUI4 249 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PARP8Q8N3A8 854 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 FBXL20Q96IG2 436 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CDHR1Q96JP9 859 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PTPN18Q99952 460 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 GATA5Q9BWX5 397 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CAB39LQ9H9S4 337 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SIAEQ9HAT2 523 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 NMRAL1Q9HBL8 299 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 POU2F3Q9UKI9 436 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 PCDHA11Q9Y5I1 949 aa9.69□□□□□ -0.86
CCDC40-212ENST00000574799 SYNJ2BP-COX16A0A087WUM0 186 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 CXCL11O14625 94 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 AQP9O43315 295 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 GP5P40197 560 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 TXNL4AP83876 142 aaKnown RBP9.68□□□□□ -0.86
CCDC40-212ENST00000574799 IL1RL1Q01638 556 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 ARHGAP1Q07960 439 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF252P-AS1Q0IIN9 211 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 TUBB3Q13509 450 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 FASTKQ14296 549 aaKnown RBP9.68□□□□□ -0.86
CCDC40-212ENST00000574799 KCNJ11Q14654 390 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 ZNF792Q3KQV3 632 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 TIGD2Q4W5G0 525 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 PAGE2BQ5JRK9 111 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 IGFN1Q86VF2 1251 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 RNF135Q8IUD6 432 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 ANKRD13AQ8IZ07 590 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 CANT1Q8WVQ1 401 aa9.68□□□□□ -0.86
CCDC40-212ENST00000574799 OSBPL10Q9BXB5 764 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms