RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 ZNF354CQ86Y25 554 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TBC1D3Q8IZP1 549 aaPredicted RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 DEFB124Q8NES8 71 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 OR2A12Q8NGT7 310 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 C1orf216Q8TAB5 229 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 ARHGEF2Q92974 986 aaKnown RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CEP44Q9C0F1 390 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 MAGEH1Q9H213 219 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 TNKS2Q9H2K2 1166 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 CATSPERBQ9H7T0 1116 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 OSGEPQ9NPF4 335 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 DYRK4Q9NR20 520 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 NDFIP2Q9NV92 336 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 DNAAF2Q9NVR5 837 aaKnown RBP9.26□□□□□ -0.93
NDE1-207ENST00000573203 PPM1HQ9ULR3 514 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 NEU3Q9UQ49 428 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 SCINQ9Y6U3 715 aa9.26□□□□□ -0.93
NDE1-207ENST00000573203 NCOR2Q9Y618 2525 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 UQCRHLA0A096LP55 91 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 A0A1W2PPC4 97 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 TMEM191CA6NGB0 347 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 KPNA3O00505 521 aaPredicted RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 SLC7A4O43246 635 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 AKR1B10O60218 316 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 SLU7O95391 586 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 UQCRHP07919 91 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 MYBL1P10243 752 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 CEACAM1P13688 526 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 PRLRP16471 622 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 GRIA4P48058 902 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 CCR5P51681 352 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 GEMIN4P57678 1058 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 TPI1P60174 286 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 RACK1P63244 317 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 ARF5P84085 180 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 CCDC15Q0P6D6 951 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 CNTN1Q12860 1018 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 SEMA3BQ13214 749 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 SLC14A1Q13336 389 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 SLC18A3Q16572 532 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 PCDH20Q8N6Y1 951 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 RTL3Q8N8U3 475 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 CHST14Q8NCH0 376 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 ACRBPQ8NEB7 543 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 TMIEQ8NEW7 156 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 GRIN3AQ8TCU5 1115 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 FNIP1Q8TF40 1166 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 ZNF592Q92610 1267 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 WDR24Q96S15 920 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 ACE2Q9BYF1 805 aaPredicted RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 TRIM7Q9C029 511 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 ISCUQ9H1K1 167 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 GAREM1Q9H706 876 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 MRPL47Q9HD33 250 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 AASDHPPTQ9NRN7 309 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 IL36AQ9UHA7 158 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 PCSK1NQ9UHG2 260 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 INTUQ9ULD6 942 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 AP4E1Q9UPM8 1137 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 FCF1Q9Y324 198 aaKnown RBP9.25□□□□□ -0.93
NDE1-207ENST00000573203 PCDHA13Q9Y5I0 950 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 ACTL7AQ9Y615 435 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 SLCO1B1Q9Y6L6 691 aa9.25□□□□□ -0.93
NDE1-207ENST00000573203 DOCK9Q9BZ29 2069 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CXorf51AA0A1B0GTR3 108 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CTAGE9A4FU28 777 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ZSCAN5CA6NGD5 496 aaPredicted RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 FGF10O15520 208 aaPredicted RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 PLRG1O43660 514 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 BUB1O43683 1085 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PRPSAP2O60256 369 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 LEFTY1O75610 366 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CTSLP07711 333 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CD59P13987 128 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 MAT2AP31153 395 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 HTR7P34969 479 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 MAGEA1P43355 309 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CCNHP51946 323 aaPredicted RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 C21orf59P57076 290 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 YBEYP58557 167 aaPredicted RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 PPP2CBP62714 309 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PPP2CAP67775 309 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 BNC1Q01954 994 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 KIF19Q2TAC6 998 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 HLA-BQ31612 363 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CARD16Q5EG05 197 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 CCDC122Q5T0U0 273 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 ERMARDQ5T6L9 678 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 AGBL4Q5VU57 503 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PAPD7Q5XG87 772 aaKnown RBP9.24□□□□□ -0.93
NDE1-207ENST00000573203 LAYNQ6UX15 382 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 LEKR1Q6ZMV7 388 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 DPY19L3Q6ZPD9 716 aa9.24□□□□□ -0.93
NDE1-207ENST00000573203 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms