RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CYTH1Q15438 398 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 MYLK3Q32MK0 819 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 ATP13A4Q4VNC1 1196 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 PIP5KL1Q5T9C9 394 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 TMCO3Q6UWJ1 677 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 ERN2Q76MJ5 926 aaKnown RBP14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 TSC1Q92574 1164 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 GDAP1L1Q96MZ0 367 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 HDAC8Q9BY41 377 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 ZDHHC5Q9C0B5 715 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 PDFQ9HBH1 243 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 FSCN3Q9NQT6 498 aa14.04□□□□□ -0.16
HERPUD1-218ENST00000569569 TMEM110-MUSTN1A8MSY1 372 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 RNF103O00237 685 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 DFFAO00273 331 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 KRIT1O00522 736 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TM4SF5O14894 197 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 IGSF6O95976 241 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 IL4RP24394 825 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 ITGB7P26010 798 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 SERPINB6P35237 376 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 ARSEP51690 589 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 AFF3P51826 1226 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TAS2R38P59533 333 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TAS2R40P59535 323 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 IL10RBQ08334 325 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 PDK2Q15119 407 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TEAD4Q15561 434 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 NEK5Q6P3R8 708 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 DGLUCYQ7Z3D6 616 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 CPNE8Q86YQ8 564 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TMTC1Q8IUR5 882 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 MAP7D3Q8IWC1 876 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 NPWQ8N729 165 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 KCTD6Q8NC69 237 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 ORAI3Q9BRQ5 295 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 GTPBP2Q9BX10 602 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 OSBPL1AQ9BXW6 950 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 EBF2Q9HAK2 575 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 SP110Q9HB58 689 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 PREBQ9HCU5 417 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TM9SF3Q9HD45 589 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 ETNK2Q9NVF9 386 aa14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 IPO11Q9UI26 975 aaKnown RBP14.03□□□□□ -0.16
HERPUD1-218ENST00000569569 TDRD6O60522 2096 aaKnown RBP14.02□□□□□ -0.16
HERPUD1-218ENST00000569569 LRRK1Q38SD2 2015 aa14.02□□□□□ -0.16
HERPUD1-218ENST00000569569 DCDC2BA2VCK2 349 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 LATO43561 262 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 PALMO75781 387 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 CD48P09326 243 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 FECHP22830 423 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 GKP32189 559 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 GJC1P36383 396 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 NUDT1P36639 197 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 MAPK8P45983 427 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 GRIA4P48058 902 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 CSNK1EP49674 416 aaKnown RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 NEK3P51956 506 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 PPP2CBP62714 309 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 RACK1P63244 317 aaKnown RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 PPP2CAP67775 309 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 DPYSL3Q14195 570 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 RFTN1Q14699 578 aaPredicted RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 SPA17Q15506 151 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 ZNF805Q5CZA5 627 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 ATXN7L2Q5T6C5 722 aaPredicted RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 FBXL19Q6PCT2 694 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 IL27RAQ6UWB1 636 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 ERMP1Q7Z2K6 904 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 TRIM69Q86WT6 500 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 NETO2Q8NC67 525 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 OR6K2Q8NGY2 324 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 CPEB1Q9BZB8 566 aaKnown RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 LUC7LQ9NQ29 371 aaKnown RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 LHX3Q9UBR4 397 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 MFHAS1Q9Y4C4 1052 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 PCDHA13Q9Y5I0 950 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 EPN1Q9Y6I3 576 aaPredicted RBP14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 SLCO1B1Q9Y6L6 691 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 SPTBN2O15020 2390 aa14.02□□□□□ -0.17
HERPUD1-218ENST00000569569 C16orf96A6NNT2 1141 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 OPHN1O60890 802 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 RNGTTO60942 597 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 UGT2B4P06133 528 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ADRB3P13945 408 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 CDC25BP30305 580 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 SLC1A1P43005 524 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 GRIK2Q13002 908 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 MMRN1Q13201 1228 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 GRM3Q14832 879 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 UAP1L1Q3KQV9 507 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ANKRD20A8PQ5CZ79 823 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ZFYVE27Q5T4F4 411 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 GDPD4Q6W3E5 623 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ARHGAP36Q6ZRI8 547 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 ADAT2Q7Z6V5 191 aaKnown RBP14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 TP53INP2Q8IXH6 220 aa14.01□□□□□ -0.17
HERPUD1-218ENST00000569569 MINDY1Q8N5J2 469 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms