RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF517Q6ZMY9 492 aaPredicted RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 CLEC20AQ6ZU45 233 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 GKN2Q86XP6 184 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 NRSN1Q8IZ57 195 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 LRRN4CLQ8ND94 238 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 SLC2A14Q8TDB8 520 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 WASF1Q92558 559 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 ARSGQ96EG1 525 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 SAAL1Q96ER3 474 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 FOXC2Q99958 501 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 NUDT22Q9BRQ3 303 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 LRIT1Q9P2V4 623 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 OSGIN2Q9Y236 505 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 NEU2Q9Y3R4 380 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 HBS1LQ9Y450 684 aaKnown RBP6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 PCDHB13Q9Y5F0 798 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 ANKRD12Q6UB98 2062 aa6.76□□□□□ -1.33
HERPUD1-217ENST00000569429 PP2D1A8MPX8 630 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TOR1BO14657 336 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 CREG1O75629 220 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 STAU1O95793 577 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 F9P00740 461 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FAM200BP0CF97 657 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 THRAP10827 490 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 SPTBP11277 2137 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 CCDC130P13994 396 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 STAT1P42224 750 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 HK3P52790 923 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 YPEL5P62699 121 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 MC2RQ01718 297 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TLE4Q04727 773 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 AAMPQ13685 434 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TOB2Q14106 344 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 SURF1Q15526 300 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 ZNF174Q15697 407 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FSCBQ5H9T9 825 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 MACC1Q6ZN28 852 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 MMS22LQ6ZRQ5 1243 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TRAPPC11Q7Z392 1133 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 LYSMD3Q7Z3D4 306 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FJX1Q86VR8 437 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 DIS3L2Q8IYB7 885 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 ZNF808Q8N4W9 903 aaPredicted RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 C4orf32Q8N8J7 132 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 OR4D9Q8NGE8 314 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 ASB12Q8WXK4 309 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 THAP4Q8WY91 577 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 HVCN1Q96D96 273 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FEM1CQ96JP0 617 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 REEP2Q9BRK0 252 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 MMTAG2Q9BU76 263 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TWSG1Q9GZX9 223 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 IKZF4Q9H2S9 585 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 FBXO8Q9NRD0 319 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 CEP83Q9Y592 693 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 PCDHGA6Q9Y5G7 932 aa6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 COPG1Q9Y678 874 aaKnown RBP6.75□□□□□ -1.33
HERPUD1-217ENST00000569429 CHD3Q12873 2000 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ZANQ9Y493 2812 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ANKRD36A6QL64 1941 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ZW10O43264 779 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ATP9BO43861 1147 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 FAM13AO94988 1023 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 KIF20AO95235 890 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CTSLP07711 333 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CTSEP14091 401 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ZNF18P17022 549 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 GARTP22102 1010 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CCL11P51671 97 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 NDST1P52848 882 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CENPCQ03188 943 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 SULT2A1Q06520 285 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 SQSTM1Q13501 440 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CDH18Q13634 790 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ZNF235Q14590 738 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 NR1D2Q14995 579 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 AMZ1Q400G9 498 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 FAM133BQ5BKY9 247 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 TMEM198Q66K66 360 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 RFWD3Q6PCD5 774 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ERN2Q76MJ5 926 aaKnown RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 APCDD1Q8J025 514 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CRYBG2Q8N1P7 616 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ARHGAP18Q8N392 663 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 HJURPQ8NCD3 748 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 CHTF18Q8WVB6 975 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 SEC14L1Q92503 715 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ERCC4Q92889 916 aaPredicted RBP6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 RELTQ969Z4 430 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 DPYSL5Q9BPU6 564 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 C1QTNF2Q9BXJ5 285 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 HDAC8Q9BY41 377 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ING2Q9H160 280 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 ACSS2Q9NR19 701 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 AGPAT4Q9NRZ5 378 aa6.74□□□□□ -1.33
HERPUD1-217ENST00000569429 STIM2Q9P246 746 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms