RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 AP1B1Q10567 949 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF211Q13398 564 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 XRCC4Q13426 336 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 ELF2Q15723 593 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 ZNF569Q5MCW4 686 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 CFAP58Q5T655 872 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 DCAF12L1Q5VU92 463 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 CDKL3Q8IVW4 592 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TP53INP2Q8IXH6 220 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TFB1MQ8WVM0 346 aaKnown RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 MAML1Q92585 1016 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 EXOC2Q96KP1 924 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TUBGCP5Q96RT8 1024 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 OMDQ99983 421 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 MGME1Q9BQP7 344 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 HEMGNQ9BXL5 484 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
SF3B3-208ENST00000567250 SLC6A17Q9H1V8 727 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 ITM2CQ9NQX7 267 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 PPM1HQ9ULR3 514 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 PYCARDQ9ULZ3 195 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 CYP8B1Q9UNU6 501 aa12.35□□□□□ -0.43
SF3B3-208ENST00000567250 TNRC6BQ9UPQ9 1833 aaKnown RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 THADAQ6YHU6 1953 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 IGHV1OR15-9A0A0B4J2B8 117 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 MID1O15344 667 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 MAP3K13O43283 966 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 NDUFS2O75306 463 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 LEFTY1O75610 366 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 RNASEH2AO75792 299 aaKnown RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 RHOBTB1O94844 696 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 PEX11BO96011 259 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CCNB1P14635 433 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 PECAM1P16284 738 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CA4P22748 312 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 ITGB7P26010 798 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 SERPINA4P29622 427 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 SIM2Q14190 667 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 NOMO1Q15155 1222 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 LLGL1Q15334 1064 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CYTH1Q15438 398 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 MYLK3Q32MK0 819 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 MAP7D1Q3KQU3 841 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 ATXN7L2Q5T6C5 722 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 PRR23BQ6ZRT6 265 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 PAF1Q8N7H5 531 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 MAIP1Q8WWC4 291 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 QKIQ96PU8 341 aaKnown RBP eCLIP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 FAM129BQ96TA1 746 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 LGMNQ99538 433 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 CPEB1Q9BZB8 566 aaKnown RBP12.34□□□□□ -0.43
SF3B3-208ENST00000567250 BTBD1Q9H0C5 482 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 PCED1AQ9H1Q7 454 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 EPC1Q9H2F5 836 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 ATP13A3Q9H7F0 1226 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 SGK2Q9HBY8 427 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 FBXL12Q9NXK8 326 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 WASF2Q9Y6W5 498 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 R4GN57 208 aa12.34□□□□□ -0.43
SF3B3-208ENST00000567250 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 A0A1W2PP55 124 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 A0A1W2PQ67 120 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 STK10O94804 968 aaKnown RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 UGT2B4P06133 528 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 CTSLP07711 333 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 CES1P23141 567 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 DPP6P42658 865 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 NEK3P51956 506 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 IFI35P80217 286 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 RPL6Q02878 288 aaKnown RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 BCL2L1Q07817 233 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 PRKD1Q15139 912 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 GDPD4Q6W3E5 623 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 LPCAT2Q7L5N7 544 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SRLQ86TD4 932 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 ZC3H18Q86VM9 953 aaKnown RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SLC35F6Q8N357 371 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 HDDC3Q8N4P3 179 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 TEX26Q8N6G2 289 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 OR6K2Q8NGY2 324 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 RLN3Q8WXF3 142 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 NUDCD1Q96RS6 583 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 VAT1Q99536 393 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 TLR10Q9BXR5 811 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 FRMD8P1Q9BZ68 369 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 NT5MQ9NPB1 228 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SCUBE2Q9NQ36 999 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 KCND1Q9NSA2 647 aa12.33□□□□□ -0.44
SF3B3-208ENST00000567250 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
SF3B3-208ENST00000567250 SEPT10Q9P0V9 454 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms