RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 DDIT4Q9NX09 232 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
CMTM3-213ENST00000566756 LOC100653049A0A140TA62 436 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 E9PBE3 544 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 H3BNX3 289 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 KLHL41O60662 606 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 AP1G2O75843 785 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 KRT34O76011 436 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 UBTFL6P0CB48 400 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-213ENST00000566756 NCAM1P13591 858 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 PIK3R1P27986 724 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 HTR7P34969 479 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 PCID2Q5JVF3 399 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 FOXB2Q5VYV0 432 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 ZFP1Q6P2D0 407 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 BEND5Q7L4P6 421 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 HPS6Q86YV9 775 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 ST13P4Q8IZP2 240 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-213ENST00000566756 PHC3Q8NDX5 983 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 C3orf58Q8NDZ4 430 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 GDPD5Q8WTR4 605 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 ATXN7L3BQ96GX2 97 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 LENG8Q96PV6 779 aaPredicted RBP16.99■□□□□ 0.31
CMTM3-213ENST00000566756 TRIM62Q9BVG3 475 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 OSBPL2Q9H1P3 480 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 EBF3Q9H4W6 596 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 WDCPQ9H6R7 721 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 CAB39LQ9H9S4 337 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 MRM3Q9HC36 420 aaKnown RBP16.99■□□□□ 0.31
CMTM3-213ENST00000566756 CHRAC1Q9NRG0 131 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 CDH9Q9ULB4 789 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 PSMD13Q9UNM6 376 aa16.99■□□□□ 0.31
CMTM3-213ENST00000566756 GOLGA8QA0A0J9YX86 632 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 GOLGA8OA6NCC3 632 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 TARM1B6A8C7 271 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 GOLGA8NF8WBI6 632 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 AP1G1O43747 822 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 POMCP01189 267 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 COL6A1P12109 1028 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 IGFBP6P24592 240 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 SERPINB5P36952 375 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 GRM3Q14832 879 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 DLG2Q15700 870 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 OGFRL1Q5TC84 451 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CWF19L1Q69YN2 538 aaKnown RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 KYQ8NBH2 561 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 ZMIZ2Q8NF64 920 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 SHKBP1Q8TBC3 707 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 OR52B2Q96RD2 323 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 TUBGCP5Q96RT8 1024 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CENPKQ9BS16 269 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 TASP1Q9H6P5 420 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CSNK1G1Q9HCP0 422 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 OR12D3Q9UGF7 316 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CASTOR2A6NHX0 329 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 HHLA1C9JL84 531 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 MAP3K13O43283 966 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 TADA2AO75478 443 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CYP11A1P05108 521 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 RAG1P15918 1043 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CCNCP24863 283 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 NMBRP28336 390 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 GMPRP36959 345 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 PPARGP37231 505 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 GRIA4P48058 902 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 MSLNQ13421 630 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 RFTN1Q14699 578 aaPredicted RBP16.98■□□□□ 0.31
CMTM3-213ENST00000566756 SFT2D3Q587I9 215 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 SH2D4BQ5SQS7 431 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 PKN3Q6P5Z2 889 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 BHLHA9Q7RTU4 235 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 MAN1C1Q9NR34 630 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 CACNG4Q9UBN1 327 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 SLC39A10Q9ULF5 831 aa16.98■□□□□ 0.31
CMTM3-213ENST00000566756 RNASEH1O60930 286 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 ANXA9O76027 345 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 SBK3P0C264 359 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CHRM1P11229 460 aaPredicted RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 VCLP18206 1134 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 TFEBP19484 476 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 C11orf91Q3C1V1 193 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 LSM12Q3MHD2 195 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 LINC01599Q8WXQ3 324 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 CCDC124Q96CT7 223 aaKnown RBP16.97■□□□□ 0.31
CMTM3-213ENST00000566756 SMARCD1Q96GM5 515 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 FCRL5Q96RD9 977 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 E2F8A0AVK6 867 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 ARHGEF37A1IGU5 675 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 M0QZQ0 153 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 GRID2O43424 1007 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 NPHS1O60500 1241 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 LRIG2O94898 1065 aa16.97■□□□□ 0.31
CMTM3-213ENST00000566756 PIGNO95427 931 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms