RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 K7ESM1 405 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 FPGTO14772 594 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 KDELR3O43731 214 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 OPA1O60313 960 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 RAMP2O60895 175 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 LRIG2O94898 1065 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 PLEKP08567 350 aaPredicted RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 KRT3P12035 628 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 UNGP13051 313 aaPredicted RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 PTP4A2Q12974 167 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 FZD2Q14332 565 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 C15orf59Q2T9L4 293 aaPredicted RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 MYLK3Q32MK0 819 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 CDKAL1Q5VV42 579 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 CDCP2Q5VXM1 449 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 RWDD4Q6NW29 188 aaKnown RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 CLEC17AQ6ZS10 378 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 LSMEM2Q8N112 164 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 OR2AP1Q8NGE2 309 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 CASKIN2Q8WXE0 1202 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 TBC1D31Q96DN5 1066 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 APOLD1Q96LR9 279 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 KLF6Q99612 283 aaPredicted RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 TM6SF2Q9BZW4 377 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 ZDHHC6Q9H6R6 413 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 NDFIP2Q9NV92 336 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 DNAJC28Q9NX36 388 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 NCKIPSDQ9NZQ3 722 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 IPO11Q9UI26 975 aaKnown RBP15.24■□□□□ 0.03
RNF40-209ENST00000566703 DNAI1Q9UI46 699 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 SALL4Q9UJQ4 1053 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 ASPMQ8IZT6 3477 aa15.24■□□□□ 0.03
RNF40-209ENST00000566703 IGLON5A6NGN9 336 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 FAM72CH0Y354 149 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 NEMP1O14524 444 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 TOR1BO14657 336 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 TPP1O14773 563 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 RAD51BO15315 384 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 FFAR2O15552 330 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 BRINP1O60477 761 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 NME1P15531 152 aaKnown RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 HDAC4P56524 1084 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 YBEYP58557 167 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 PFN3P60673 137 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 RAD51Q06609 339 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 KRT31Q15323 416 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 CDO1Q16878 200 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 INO80DQ53TQ3 878 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 FAM72AQ5TYM5 149 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 FAM72DQ6L9T8 149 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 TMC6Q7Z403 805 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 PTAR1Q7Z6K3 402 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 PARGQ86W56 976 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 FAM72BQ86X60 149 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 PHF13Q86YI8 300 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 RYBPQ8N488 228 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 JOSD2Q8TAC2 188 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 SLC30A5Q8TAD4 765 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 BTN2A2Q8WVV5 523 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 TBATAQ96M53 351 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 UBL7Q96S82 380 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 C11orf70Q9BRQ4 267 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 PRORYQ9H606 182 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 NLRC4Q9NPP4 1024 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 FAM207AQ9NSI2 230 aaPredicted RBP15.23■□□□□ 0.03
RNF40-209ENST00000566703 ADAM22Q9P0K1 906 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 MFHAS1Q9Y4C4 1052 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 ACTL7AQ9Y615 435 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 SPEGQ15772 3267 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 DOCK9Q9BZ29 2069 aa15.23■□□□□ 0.03
RNF40-209ENST00000566703 SIGLEC16A6NMB1 481 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 EIF4E1BA6NMX2 242 aaKnown RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 TK2O00142 265 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 AREL1O15033 823 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 LZTS3O60299 673 aaPredicted RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 CALB1P05937 261 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 GPD1P21695 349 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 ITPKBP27987 946 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 ABL2P42684 1182 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 YPEL5P62699 121 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 PTK2BQ14289 1009 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 TBC1D25Q3MII6 688 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 RAB6CQ53S08 254 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 ZNF542PQ5EBM4 170 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 ZCCHC8Q6NZY4 707 aaKnown RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 WDR59Q6PJI9 974 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 SLFN11Q7Z7L1 901 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 LSM14AQ8ND56 463 aaKnown RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 C3orf20Q8ND61 904 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 FAM172AQ8WUF8 416 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 VOPP1Q96AW1 172 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 GRAMD1AQ96CP6 724 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 BBC3Q96PG8 261 aaPredicted RBP15.22■□□□□ 0.03
RNF40-209ENST00000566703 DEPDC7Q96QD5 511 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 PCDHB18PQ96TA0 734 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 SELENOOQ9BVL4 669 aa15.22■□□□□ 0.03
RNF40-209ENST00000566703 RAB6CQ9H0N0 254 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms