RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 IL1R2P27930 398 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 CD38P28907 300 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 PPP2CBP62714 309 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 PPP2CAP67775 309 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 KCNT1Q5JUK3 1230 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 NAPEPLDQ6IQ20 393 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 FBXL19Q6PCT2 694 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 SERAC1Q96JX3 654 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 BTBD6Q96KE9 485 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 SLC6A18Q96N87 628 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 GAREM1Q9H706 876 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 NHEJ1Q9H9Q4 299 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-211ENST00000565922 SP110Q9HB58 689 aa20.18■□□□□ 0.82
CMTM3-211ENST00000565922 CWC15Q9P013 229 aaKnown RBP20.18■□□□□ 0.82
CMTM3-211ENST00000565922 RCOR3Q9P2K3 495 aaPredicted RBP20.18■□□□□ 0.82
CMTM3-211ENST00000565922 PCNX2A6NKB5 2137 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 KRIT1O00522 736 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 MAGEC1O60732 1142 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 PRAMEF11O60813 436 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 RNGTTO60942 597 aaKnown RBP20.17■□□□□ 0.82
CMTM3-211ENST00000565922 GJB3O75712 270 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 RARAP10276 462 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 SERPINB6P35237 376 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 SSR1P43307 286 aaKnown RBP20.17■□□□□ 0.82
CMTM3-211ENST00000565922 TAS2R38P59533 333 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 SLC25A11Q02978 314 aaKnown RBP20.17■□□□□ 0.82
CMTM3-211ENST00000565922 DPYSQ14117 519 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 KRT81Q14533 505 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 GRM3Q14832 879 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 HLA-BQ31612 363 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 MYLK3Q32MK0 819 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 ZNF805Q5CZA5 627 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 PSAPL1Q6NUJ1 521 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 TMCO3Q6UWJ1 677 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 LEKR1Q6ZMV7 388 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 RAB7BQ96AH8 199 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 CELF6Q96J87 481 aaKnown RBP20.17■□□□□ 0.82
CMTM3-211ENST00000565922 SLC39A8Q9C0K1 460 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 PDFQ9HBH1 243 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 SLCO1B1Q9Y6L6 691 aa20.17■□□□□ 0.82
CMTM3-211ENST00000565922 ADRB1P08588 477 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 ADRB3P13945 408 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 PAPOLAP51003 745 aaKnown RBP20.16■□□□□ 0.82
CMTM3-211ENST00000565922 TBX2Q13207 712 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-211ENST00000565922 RFTN1Q14699 578 aaPredicted RBP20.16■□□□□ 0.82
CMTM3-211ENST00000565922 KIF19Q2TAC6 998 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 AFMIDQ63HM1 303 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 KIAA1161Q6NSJ0 714 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 POLNQ7Z5Q5 900 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 HORMAD1Q86X24 394 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 OR2I1PQ8NGU4 316 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 CHP1Q99653 195 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 KLC2Q9H0B6 622 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 EBF2Q9HAK2 575 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 MFHAS1Q9Y4C4 1052 aa20.16■□□□□ 0.82
CMTM3-211ENST00000565922 PRAMEF26H0Y7S4 382 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 DFFAO00273 331 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 AP1G1O43747 822 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PROSCO94903 275 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PCDH8O95206 1070 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 TCF4P15884 667 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 MAT2AP31153 395 aaKnown RBP20.15■□□□□ 0.82
CMTM3-211ENST00000565922 MAN1A1P33908 653 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 CDH6P55285 790 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 BNC1Q01954 994 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 IL10RBQ08334 325 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 OVGP1Q12889 678 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 STAT4Q14765 748 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 SUZ12Q15022 739 aaKnown RBP20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PARS2Q7L3T8 475 aaKnown RBP20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PIP4P1Q86T03 277 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 IQCHQ86VS3 1027 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 RHOT2Q8IXI1 618 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 DEFB124Q8NES8 71 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 OR6K2Q8NGY2 324 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 CSPG4P5Q96PW8 444 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PACSIN1Q9BY11 444 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
CMTM3-211ENST00000565922 TM7SF3Q9NS93 570 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 PCDHGB2Q9Y5G2 931 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 SNX11Q9Y5W9 270 aa20.15■□□□□ 0.82
CMTM3-211ENST00000565922 KNL1Q8NG31 2342 aa20.14■□□□□ 0.82
CMTM3-211ENST00000565922 A0A1W2PQU0 124 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 PALMO75781 387 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 UGT2B4P06133 528 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 KRT7P08729 469 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 CD59P13987 128 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 CTSKP43235 329 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 CCT8P50990 548 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 RPS21P63220 83 aaKnown RBP20.14■□□□□ 0.81
CMTM3-211ENST00000565922 ATXN7L2Q5T6C5 722 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-211ENST00000565922 GDPD4Q6W3E5 623 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 ARHGAP12Q8IWW6 846 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 OXR1Q8N573 874 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 NPWQ8N729 165 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 MFSD2AQ8NA29 543 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 MRFAP1L1Q96HT8 127 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 FEM1CQ96JP0 617 aa20.14■□□□□ 0.81
CMTM3-211ENST00000565922 CINPQ9BW66 212 aaPredicted RBP20.14■□□□□ 0.81
CMTM3-211ENST00000565922 PCDH18Q9HCL0 1135 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms