RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 TRIB2Q92519 343 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DPF1Q92782 380 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 FAM149B1Q96BN6 582 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 USP26Q9BXU7 913 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 FARSBQ9NSD9 589 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TBC1D13Q9NVG8 400 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 B4GALT6Q9UBX8 382 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 HCN2Q9UL51 889 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DNAJC16Q9Y2G8 782 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 KCNE2Q9Y6J6 123 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SPTBN5Q9NRC6 3674 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 C2orf92A0A1B0GVN3 265 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 XKRY2A2RUG3 117 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 A6NL46 340 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAD51BO15315 384 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RNF113AO15541 343 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TLR2O60603 784 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SMNDC1O75940 238 aaKnown RBP eCLIP3.13□□□□□ -1.91
CHD9-216ENST00000565803 OR5F1O95221 314 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TGFAP01135 160 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ALBP02768 609 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RPLP2P05387 115 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 CHN1P15882 459 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PRKACBP22694 351 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 AZGP1P25311 298 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TKTP29401 623 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 PDHA2P29803 388 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 LRPAP1P30533 357 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TCF7P36402 384 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 GARSP41250 739 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 SYKP43405 635 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 MFAP3P55082 362 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TNFRSF17Q02223 184 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PPATQ06203 517 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CHIT1Q13231 466 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 MADCAM1Q13477 382 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CRYMQ14894 314 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 NTRK3Q16288 839 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CARTPTQ16568 116 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 NTRK2Q16620 822 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DUSP28Q4G0W2 176 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CLVS2Q5SYC1 327 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 DAB2IPQ5VWQ8 1189 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 FCRLBQ6BAA4 426 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 KLHL35Q6PF15 583 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ZNF813Q6ZN06 617 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 GADL1Q6ZQY3 521 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 BEND4Q6ZU67 534 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ANKFN1Q8N957 763 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 IQUBQ8NA54 791 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CNNM3Q8NE01 707 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RDM1Q8NG50 284 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 OR8K5Q8NH50 307 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ZNF671Q8TAW3 534 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 HMGB4Q8WW32 186 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 NRG4Q8WWG1 115 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 BRI3BPQ8WY22 251 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CHMP6Q96FZ7 201 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CNOT6LQ96LI5 555 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TCF12Q99081 682 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TBCDQ9BTW9 1192 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 FAM107BQ9H098 131 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 BTBD1Q9H0C5 482 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 VCX2Q9H322 139 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TOR3AQ9H497 397 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ECT2Q9H8V3 914 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 LRRC40Q9H9A6 602 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CGGBP1Q9UFW8 167 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 CROTQ9UKG9 612 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 USP18Q9UMW8 372 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 KCNMB2Q9Y691 235 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ZNF804BA4D1E1 1349 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 SLC35F4A4IF30 521 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ZNF879B4DU55 563 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 HNRNPDLO14979 420 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TMCC1O94876 653 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CYP19A1P11511 503 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 BMP6P22004 513 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ALDH3A1P30838 453 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 USP11P51784 963 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 HK2P52789 917 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ALDH18A1P54886 795 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 LGALS4P56470 323 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PER3P56645 1201 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 ADAM17P78536 824 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 GPR176Q14439 515 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAB3GAP1Q15042 981 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RRS1Q15050 365 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 DPYSL2Q16555 572 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 INSCQ1MX18 579 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 PCID2Q5JVF3 399 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 C6orf183Q5T699 404 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAET1GQ6H3X3 334 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RINT1Q6NUQ1 792 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 KDM7AQ6ZMT4 941 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 CYP4V2Q6ZWL3 525 aaPredicted RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 TRMT10CQ7L0Y3 403 aaKnown RBP3.13□□□□□ -1.91
CHD9-216ENST00000565803 HEATR3Q7Z4Q2 680 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 TMC3Q7Z5M5 1100 aa3.13□□□□□ -1.91
CHD9-216ENST00000565803 RAB44Q7Z6P3 723 aaPredicted RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms