RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 ZNF449Q6P9G9 518 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LVRNQ6Q4G3 990 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CYS1Q717R9 158 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GAREM2Q75VX8 874 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SPATA21Q7Z572 469 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LINC00523Q86TU6 105 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PRPF39Q86UA1 669 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RASSF3Q86WH2 238 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LRRC49Q8IUZ0 686 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NPAS3Q8IXF0 933 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TP53INP2Q8IXH6 220 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MPP5Q8N3R9 675 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RTL3Q8N8U3 475 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TTC16Q8NEE8 873 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MRPS31Q92665 395 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CELF6Q96J87 481 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FCRL2Q96LA5 508 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TSGA13Q96PP4 275 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KLF6Q99612 283 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LRRC3Q9BY71 257 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TLR8Q9NR97 1041 aaKnown RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SYBUQ9NX95 663 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MKS1Q9NXB0 559 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DONSONQ9NYP3 566 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CLIC5Q9NZA1 410 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 BFARQ9NZS9 450 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NEU3Q9UQ49 428 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANKRD11Q6UB99 2663 aaPredicted RBP7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ACACBO00763 2458 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MYLKQ15746 1914 aa7.56□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NUP210Q8TEM1 1887 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 USP24Q9UPU5 2620 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM92AA1XBS5 289 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C19orf67A6NJJ6 358 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCT8L1PA6NM43 557 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 WASH4PA8MWX3 477 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CXorf49A8MYA2 514 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KCNU1A8MYU2 1149 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GOLGA8RI6L899 631 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZBTB24O43167 697 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MOSPD3O75425 235 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PIAS1O75925 651 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM155BO75949 473 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ANXA9O76027 345 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ALDH1A2O94788 518 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C1QAP02745 245 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 F11P03951 625 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 POLBP06746 335 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 LAMP2P13473 410 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CCNCP24863 283 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ADRA1DP25100 572 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FOXN2P32314 431 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MAGEA9P43362 315 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NPY2RP49146 381 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TUBP50607 506 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NEK3P51956 506 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 EPHA5P54756 1037 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 GEMP55040 296 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 NIPAL4Q0D2K0 466 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 EFEMP1Q12805 493 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TAF10Q12962 218 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DNAJC3Q13217 504 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FRG1Q14331 258 aaKnown RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CRYMQ14894 314 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC1A5Q15758 541 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 C10orf120Q5SQS8 335 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM182AQ5T1J6 154 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ACBD5Q5T8D3 534 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FYB2Q5VWT5 728 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TXNDC8Q6A555 127 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRMT10BQ6PF06 316 aaKnown RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MTSS1LQ765P7 747 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CHSY1Q86X52 802 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 RNF135Q8IUD6 432 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ARHGAP12Q8IWW6 846 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MAB21L3Q8N8X9 362 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 DNAAF3Q8N9W5 541 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 OR52K1Q8NGK4 314 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZSCAN18Q8TBC5 510 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TCP10LQ8TDR4 215 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TTC17Q96AE7 1141 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 ZNF669Q96BR6 464 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TRMT2BQ96GJ1 504 aaKnown RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SLC39A13Q96H72 371 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 SERAC1Q96JX3 654 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 TEKT5Q96M29 485 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CEP295NLQ96MC4 621 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 AGAP3Q96P47 875 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CDK5RAP1Q96SZ6 601 aaKnown RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KXD1Q9BQD3 176 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 MLPHQ9BV36 600 aaPredicted RBP7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PITPNM3Q9BZ71 974 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 KDM4CQ9H3R0 1056 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IL21Q9HBE4 155 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 PLAC1Q9HBJ0 212 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 CASS4Q9NQ75 786 aa7.55□□□□□ -1.2
MAP1LC3B-205ENST00000564638 IL37Q9NZH6 218 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms