RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 RXRGP48443 463 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 TPI1P60174 286 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 LRRC73Q5JTD7 316 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 SFMBT2Q5VUG0 894 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 TMPRSS7Q7RTY8 843 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 GALNT15Q8N3T1 639 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 HMCESQ96FZ2 354 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 KLC2Q9H0B6 622 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 CATSPERBQ9H7T0 1116 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 RALYQ9UKM9 306 aaKnown RBP17.97■□□□□ 0.47
NME3-205ENST00000563854 FADS3Q9Y5Q0 445 aa17.97■□□□□ 0.47
NME3-205ENST00000563854 C16orf96A6NNT2 1141 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 RASA4BC9J798 803 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 RASA4O43374 803 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 DKK1O94907 266 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 GSRP00390 522 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 ABL2P42684 1182 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 CLDN6P56747 220 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 RHOAP61586 193 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 RPS21P63220 83 aaKnown RBP17.96■□□□□ 0.47
NME3-205ENST00000563854 TMEM259Q4ZIN3 620 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 ZNF805Q5CZA5 627 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 E4F1Q66K89 784 aaPredicted RBP17.96■□□□□ 0.47
NME3-205ENST00000563854 KIAA1161Q6NSJ0 714 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 GCNT7Q6ZNI0 430 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 MDM1Q8TC05 714 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 GDAP1L1Q96MZ0 367 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 KLHL32Q96NJ5 620 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 NAP1L5Q96NT1 182 aaPredicted RBP17.96■□□□□ 0.47
NME3-205ENST00000563854 SYT11Q9BT88 431 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 CCDC86Q9H6F5 360 aaKnown RBP17.96■□□□□ 0.47
NME3-205ENST00000563854 NOL6Q9H6R4 1146 aaKnown RBP17.96■□□□□ 0.47
NME3-205ENST00000563854 PARVAQ9NVD7 372 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 GGT7Q9UJ14 662 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 AP4E1Q9UPM8 1137 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 PTPRBP23467 1997 aa17.96■□□□□ 0.47
NME3-205ENST00000563854 COL5A1P20908 1838 aaPredicted RBP17.95■□□□□ 0.46
NME3-205ENST00000563854 ZSCAN5CA6NGD5 496 aaPredicted RBP17.95■□□□□ 0.46
NME3-205ENST00000563854 A6NNZ2 444 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 FFAR2O15552 330 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 RFPL3O75679 317 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 IGSF6O95976 241 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 PAK4O96013 591 aaPredicted RBP17.95■□□□□ 0.46
NME3-205ENST00000563854 AIF1P55008 147 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 KLHL30Q0D2K2 578 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 MAMLD1Q13495 774 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 MYLK3Q32MK0 819 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 PPP1R2P3Q6NXS1 205 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 ZNF571Q7Z3V5 609 aaPredicted RBP17.95■□□□□ 0.46
NME3-205ENST00000563854 ZNF653Q96CK0 615 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 EXOC2Q96KP1 924 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 SLC17A9Q9BYT1 436 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 DHX35Q9H5Z1 703 aaKnown RBP17.95■□□□□ 0.46
NME3-205ENST00000563854 CAAP1Q9H8G2 361 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 PCSK1NQ9UHG2 260 aa17.95■□□□□ 0.46
NME3-205ENST00000563854 PLXNB3Q9ULL4 1909 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 WDFY3Q8IZQ1 3526 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 A0A1B0GTH6 734 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 A0A1W2PQC6 194 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 SYCE3A1L190 88 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 IGLON5A6NGN9 336 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 RAD51BO15315 384 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 FGF10O15520 208 aaPredicted RBP17.94■□□□□ 0.46
NME3-205ENST00000563854 POP4O95707 220 aaKnown RBP17.94■□□□□ 0.46
NME3-205ENST00000563854 SKILP12757 684 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 ACADVLP49748 655 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 TPM4P67936 248 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 SGCGQ13326 291 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 FGL2Q14314 439 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 PARP15Q460N3 678 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 ZNF542PQ5EBM4 170 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 GDPD4Q6W3E5 623 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 Q6ZSR6 202 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 PLPP6Q8IY26 295 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 CELF6Q96J87 481 aaKnown RBP17.94■□□□□ 0.46
NME3-205ENST00000563854 LRIG1Q96JA1 1093 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 VCPIP1Q96JH7 1222 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 NCAPGQ9BPX3 1015 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 OSBPL1AQ9BXW6 950 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 UCKL1Q9NWZ5 548 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 DNAJC28Q9NX36 388 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 MYO1AQ9UBC5 1043 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 CNOT8Q9UFF9 292 aaKnown RBP17.94■□□□□ 0.46
NME3-205ENST00000563854 CHD6Q8TD26 2715 aa17.94■□□□□ 0.46
NME3-205ENST00000563854 CHD5Q8TDI0 1954 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 CXorf51AA0A1B0GTR3 108 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 EEF2KO00418 725 aaKnown RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 DAPK3O43293 454 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 AP1G1O43747 822 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 RNF8O76064 485 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 FTLP02792 175 aaPredicted RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 YBEYP58557 167 aaPredicted RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 RAD51Q06609 339 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 SERINC3Q13530 473 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 IQCB1Q15051 598 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 SMAD1Q15797 465 aaKnown RBP17.93■□□□□ 0.46
NME3-205ENST00000563854 CA9Q16790 459 aa17.93■□□□□ 0.46
NME3-205ENST00000563854 HS1BP3Q53T59 392 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms