RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DENND1CQ8IV53 801 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ARID3BQ8IVW6 561 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 SLC39A11Q8N1S5 342 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF461Q8TAF7 563 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 AUTS2Q8WXX7 1259 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 WBP2Q969T9 261 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 KLHL29Q96CT2 875 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 PRICKLE1Q96MT3 831 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 GPR22Q99680 433 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 MRM3Q9HC36 420 aaKnown RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 FBXO6Q9NRD1 293 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ZFP69BQ9UJL9 534 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 SLC39A10Q9ULF5 831 aa19.36■□□□□ 0.69
SMPD3-203ENST00000563226 ZFP37Q9Y6Q3 630 aaPredicted RBP19.36■□□□□ 0.69
SMPD3-203ENST00000563226 CBX6O95503 412 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 KITP10721 976 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 NQO1P15559 274 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 HNRNPH1P31943 449 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 SGSHP51688 502 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 RPS24P62847 133 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 ELF3P78545 371 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 LBRQ14739 615 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 C5orf22Q49AR2 442 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 CLNKQ7Z7G1 428 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 CNTN4Q8IWV2 1026 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 TNS4Q8IZW8 715 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 PDZD8Q8NEN9 1154 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 PTCD2Q8WV60 388 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF689Q96CS4 500 aaPredicted RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 TMEM237Q96Q45 408 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 RC3H2Q9HBD1 1191 aaKnown RBP19.35■□□□□ 0.69
SMPD3-203ENST00000563226 ARNT2Q9HBZ2 717 aa19.35■□□□□ 0.69
SMPD3-203ENST00000563226 PRAMEF11O60813 436 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SAT1P21673 171 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SERPINB3P29508 390 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 CSRP3P50461 194 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 DSG1Q02413 1049 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 TNK2Q07912 1038 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 MSLNQ13421 630 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 MFSD6LQ8IWD5 586 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 OR7D4Q8NG98 312 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 NSMCE1Q8WV22 266 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 OVCA2Q8WZ82 227 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SKA1Q96BD8 255 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 TADA1Q96BN2 335 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 CEP295NLQ96MC4 621 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 CDK5RAP1Q96SZ6 601 aaKnown RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 RNF38Q9H0F5 515 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 RHOJQ9H4E5 214 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 PDFQ9HBH1 243 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 KLC4Q9NSK0 619 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 COPG2Q9UBF2 871 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 UXTQ9UBK9 157 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 HAO1Q9UJM8 370 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 C2orf78A6NCI8 922 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 CFAP73A6NFT4 308 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 H3BNC9 293 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 MPOP05164 745 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 ARRB2P32121 409 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SKIV2L2P42285 1042 aaKnown RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SLC1A2P43004 574 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 YBEYP58557 167 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 CTC1Q2NKJ3 1217 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 ACBD5Q5T8D3 534 aaPredicted RBP19.34■□□□□ 0.69
SMPD3-203ENST00000563226 C1orf53Q5VUE5 145 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 SLC41A1Q8IVJ1 513 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 PPP1R14CQ8TAE6 165 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 TMEM169Q96HH4 297 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 ZNF558Q96NG5 402 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 ARHGEF3Q9NR81 526 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 VPS45Q9NRW7 570 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 NSMCE4AQ9NXX6 385 aa19.34■□□□□ 0.69
SMPD3-203ENST00000563226 KIAA1671Q9BY89 1806 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 PHGDHO43175 533 aaKnown RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 STC2O76061 302 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 IRF1P10914 325 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 HOXD9P28356 352 aaPredicted RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 CORO1AP31146 461 aaKnown RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 AVPR1AP37288 418 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 HARS2P49590 506 aaKnown RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 SERPINH1P50454 418 aaKnown RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 DBN1Q16643 649 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 KIAA0930Q6ICG6 404 aaPredicted RBP19.33■□□□□ 0.69
SMPD3-203ENST00000563226 SEMA3CQ99985 751 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 TXLNGQ9NUQ3 528 aa19.33■□□□□ 0.69
SMPD3-203ENST00000563226 AURKAO14965 403 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 KRT16P08779 473 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 CLTBP09497 229 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 ATXN1LP0C7T5 689 aaKnown RBP19.32■□□□□ 0.68
SMPD3-203ENST00000563226 SLC11A2P49281 568 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 SIRPB2Q5JXA9 342 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 TMCO4Q5TGY1 634 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 TTC7BQ86TV6 843 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 ALYREFQ86V81 257 aaKnown RBP19.32■□□□□ 0.68
SMPD3-203ENST00000563226 CRLF3Q8IUI8 442 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 SPNS2Q8IVW8 549 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 PNPLA1Q8N8W4 532 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 MYRFLQ96LU7 910 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 HERC2P3Q9BVR0 1158 aa19.32■□□□□ 0.68
SMPD3-203ENST00000563226 PLXNA4Q9HCM2 1894 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms