RNA–Protein interactions for RNA: ENST00000562712.5

CDH11-204, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-204ENST00000562712 TMIEQ8NEW7 156 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 TSTD1Q8NFU3 115 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 HTR3CQ8WXA8 447 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 OR8D1Q8WZ84 308 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 LRIG1Q96JA1 1093 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 MRGPRX1Q96LB2 322 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 VAT1Q99536 393 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 CPEB1Q9BZB8 566 aaKnown RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 MKRN2Q9H000 416 aaKnown RBP12.94□□□□□ -0.34
CDH11-204ENST00000562712 USP29Q9HBJ7 922 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 RBM22Q9NW64 420 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH11-204ENST00000562712 LHX3Q9UBR4 397 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 PPM1HQ9ULR3 514 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 ATP8A1Q9Y2Q0 1164 aa12.94□□□□□ -0.34
CDH11-204ENST00000562712 OTOGLQ3ZCN5 2332 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 TCRBV21S2A2A0A5A6 115 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 MUSKO15146 869 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 LIASO43766 372 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 BNIP3LO60238 219 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 PRNPP04156 253 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 GABRG2P18507 467 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 RBL1P28749 1068 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 STIP1P31948 543 aaKnown RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 CHRNA3P32297 505 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 CCNHP51946 323 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 NRLP54845 237 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 BYSLQ13895 437 aaKnown RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 FAM46CQ5VWP2 391 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 ALG1LQ6GMV1 187 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 B4GALNT4Q76KP1 1039 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 SRLQ86TD4 932 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 RASSF3Q86WH2 238 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 CREG2Q8IUH2 290 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 CDKL3Q8IVW4 592 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 PGBD5Q8N414 524 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 NKD2Q969F2 451 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 ZNF419Q96HQ0 510 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 HHIPQ96QV1 700 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 FAM118BQ9BPY3 351 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 MGME1Q9BQP7 344 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 HEPHQ9BQS7 1158 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 FAM126AQ9BYI3 521 aaPredicted RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 TM6SF2Q9BZW4 377 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 IL36AQ9UHA7 158 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 TRHDEQ9UKU6 1024 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 DNPEPQ9ULA0 475 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 SCML1Q9UN30 329 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 DRG1Q9Y295 367 aaKnown RBP12.93□□□□□ -0.34
CDH11-204ENST00000562712 CKAP5Q14008 2032 aa12.93□□□□□ -0.34
CDH11-204ENST00000562712 CFAP69A5D8W1 941 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 NEBLO76041 1014 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 ADH1BP00325 375 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 IL1BP01584 269 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 ITGAVP06756 1048 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 TDGF1P13385 188 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 NDUFV2P19404 249 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 CR2P20023 1033 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 PTPRZ1P23471 2315 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 PTPN3P26045 913 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 DEKP35659 375 aaKnown RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 MAPK8P45983 427 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 SCNN1BP51168 640 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 RPS14P62263 151 aaKnown RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 WASHC5Q12768 1159 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 ZBTB17Q13105 803 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 OASLQ15646 514 aaKnown RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 ARSIQ5FYB1 569 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 ATXN7L2Q5T6C5 722 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 ZNF776Q68DI1 518 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 MMAAQ8IVH4 418 aaKnown RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 RYBPQ8N488 228 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 PRELID2Q8N945 189 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 CHST14Q8NCH0 376 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 HCAR2Q8TDS4 363 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 HMGB4Q8WW32 186 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 C1orf54Q8WWF1 131 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 VOPP1Q96AW1 172 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 SIPA1Q96FS4 1042 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 TEKT5Q96M29 485 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 NUDCD1Q96RS6 583 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 TUBGCP5Q96RT8 1024 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 OSBPL1AQ9BXW6 950 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 POLR1EQ9GZS1 481 aaKnown RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 SEPT10Q9P0V9 454 aa12.92□□□□□ -0.34
CDH11-204ENST00000562712 EP300Q09472 2414 aaPredicted RBP12.92□□□□□ -0.34
CDH11-204ENST00000562712 ZNF292O60281 2723 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 SHROOM3Q8TF72 1996 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 GPR179Q6PRD1 2367 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.91□□□□□ -0.34
CDH11-204ENST00000562712 C5orf60A6NFR6 353 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 C1QTNF3-AMACRE9PGA6 284 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 RNF103O00237 685 aa12.91□□□□□ -0.34
CDH11-204ENST00000562712 KRIT1O00522 736 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms