RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 RXFP2Q8WXD0 754 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 BAP1Q92560 729 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FGF11Q92914 225 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ARHGEF2Q92974 986 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ISG20Q96AZ6 181 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FEM1CQ96JP0 617 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 UBL7Q96S82 380 aaPredicted RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DACH1Q9UI36 760 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DNAI1Q9UI46 699 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KLF15Q9UIH9 416 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GGT7Q9UJ14 662 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ITM2BQ9Y287 266 aa16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TDRD6O60522 2096 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TRPM6Q9BX84 2022 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CXorf51AA0A1B0GTR3 108 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 IGLON5A6NGN9 336 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SPINT1O43278 529 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 OPA1O60313 960 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CSF2P04141 144 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NME1P15531 152 aaKnown RBP16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 EEF1GP26641 437 aaKnown RBP16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MAPKAPK2P49137 400 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 HNRNPKP61978 463 aaKnown RBP eCLIP16.98■□□□□ 0.312e-7■■■■■ 29.9
VPS9D1-AS1-201ENST00000562298 FMO1Q01740 532 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CDR2Q01850 454 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TBC1D25Q3MII6 688 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RWDD4Q6NW29 188 aaKnown RBP16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 LEKR1Q6ZMV7 388 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PARGQ86W56 976 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ZNF677Q86XU0 584 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PLPP6Q8IY26 295 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CCDC185Q8N715 623 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM181AQ8N9Y4 354 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SLC30A5Q8TAD4 765 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GPT2Q8TD30 523 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 LENG8Q96PV6 779 aaPredicted RBP16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 C1QTNF2Q9BXJ5 285 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TMEM248Q9NWD8 314 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 COL27A1Q8IZC6 1860 aaPredicted RBP16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KNTC1P50748 2209 aa16.98■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NEMP2A6NFY4 417 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 C2CD4BA6NLJ0 364 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 C16orf96A6NNT2 1141 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 EPHB6O15197 1021 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 LRIG2O94898 1065 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GP1BAP07359 652 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RHOQP17081 205 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SDC4P31431 198 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ACTN2P35609 894 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ETFBP38117 255 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RABIFP47224 123 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 HDAC4P56524 1084 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 JAM2P57087 298 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PTP4A2Q12974 167 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PDE1CQ14123 709 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ARL13BQ3SXY8 428 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RYBPQ8N488 228 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FCRL3Q96P31 734 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 C11orf70Q9BRQ4 267 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 DUSP23Q9BVJ7 150 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 NUP62CLQ9H1M0 184 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 OSBPL2Q9H1P3 480 aa16.97■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 EIF4E1BA6NMX2 242 aaKnown RBP16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 KRIT1O00522 736 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FPGTO14772 594 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TSPAN6O43657 245 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 GSRP00390 522 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PRB1P04280 392 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MPOP05164 745 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 UGT2B4P06133 528 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PTPN9P43378 593 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 PFN3P60673 137 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 TLE3Q04726 772 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CCDC173Q0VFZ6 552 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SGCGQ13326 291 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 STRADAQ7RTN6 431 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 SPACA3Q8IXA5 215 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 OR2AP1Q8NGE2 309 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 IFI44Q8TCB0 444 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CENPIQ92674 756 aaPredicted RBP16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RAB7BQ96AH8 199 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 MAGEH1Q9H213 219 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 VPS16Q9H269 839 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 RETREG1Q9H6L5 497 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 USP29Q9HBJ7 922 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 FAM207AQ9NSI2 230 aaPredicted RBP16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
VPS9D1-AS1-201ENST00000562298 H3BM21 787 aa16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 RAMP2O60895 175 aa16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 CSO75390 466 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 PLEKP08567 350 aaPredicted RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 UNGP13051 313 aaPredicted RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 SOX5P35711 763 aa16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 GEMIN4P57678 1058 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 POLR2FP61218 127 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 EIF2B5Q13144 721 aaKnown RBP16.95■□□□□ 0.3
VPS9D1-AS1-201ENST00000562298 LRRC73Q5JTD7 316 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms