RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 ADSLP30566 484 aaPredicted RBP13.48□□□□□ -0.25
CLK3-206ENST00000562078 ETFBP38117 255 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 VEGFBP49765 207 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 PUS10Q3MIT2 529 aaKnown RBP13.48□□□□□ -0.25
CLK3-206ENST00000562078 FASTKD1Q53R41 847 aaKnown RBP13.48□□□□□ -0.25
CLK3-206ENST00000562078 SLC9A4Q6AI14 798 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 DENND1BQ6P3S1 775 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 DRICH1Q6PGQ1 229 aaPredicted RBP13.48□□□□□ -0.25
CLK3-206ENST00000562078 PDIK1LQ8N165 341 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 WDTC1Q8N5D0 677 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 LRTOMTQ8WZ04 291 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 TRIB2Q92519 343 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 SLITRK1Q96PX8 696 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 SERPINI1Q99574 410 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 BCO2Q9BYV7 579 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 KLQ9UEF7 1012 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 IP6K2Q9UHH9 426 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 PCDHGC3Q9UN70 934 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 SLC27A5Q9Y2P5 690 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 PCDHGA11Q9Y5H2 935 aa13.48□□□□□ -0.25
CLK3-206ENST00000562078 TMEM191CA6NGB0 347 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TSPAN1O60635 241 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 AKR1A1P14550 325 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 POLR2EP19388 210 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 BMPR1AP36894 532 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 GNL1P36915 607 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 SERPINB5P36952 375 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 HPCAL1P37235 193 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 SLC1A6P48664 564 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 CPT1AP50416 773 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 RPL10AP62906 217 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 KLF10Q13118 480 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 CARTPTQ16568 116 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 SLC10A6Q3KNW5 377 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 PIGGQ5H8A4 983 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 MARCH8Q5T0T0 291 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 SIGIRRQ6IA17 410 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 DCUN1D2Q6PH85 259 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 SLC26A11Q86WA9 606 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 KIAA0319LQ8IZA0 1049 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 SIX6OS1Q8N1H7 587 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 EGLN2Q96KS0 407 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 CIB1Q99828 191 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 ANKRD60Q9BZ19 345 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 RNF186Q9NXI6 227 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 ANKMY1Q9P2S6 941 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 BCAP29Q9UHQ4 241 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 FBXO9Q9UK97 447 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 GINS2Q9Y248 185 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 HTRA2O43464 458 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 SNRPAP09012 282 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 UBL4AP11441 157 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 HOXD8P13378 290 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 MAP4P27816 1152 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 NRLP54845 237 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 OGDHQ02218 1023 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TMEM132DQ14C87 1099 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 INAVAQ3KP66 663 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 CCDC58Q4VC31 144 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 FAM47CQ5HY64 1035 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 MTX3Q5HYI7 312 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TTC33Q6PID6 262 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 BNC2Q6ZN30 1099 aaPredicted RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 UTS2BQ765I0 119 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 DSELQ8IZU8 1212 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 NDUFAF2Q8N183 169 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TTC39CQ8N584 583 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 CFAP36Q96G28 342 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TWNKQ96RR1 684 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 MARCH7Q9H992 704 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 NANOGQ9H9S0 305 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 POLR1BQ9H9Y6 1135 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TBC1D14Q9P2M4 693 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 TJP2Q9UDY2 1190 aa13.47□□□□□ -0.25
CLK3-206ENST00000562078 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
CLK3-206ENST00000562078 F8VP50 259 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 TEX28O15482 410 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 AVILO75366 819 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 KRT1P04264 644 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 MYL3P08590 195 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 ARRB2P32121 409 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 CDH5P33151 784 aaPredicted RBP13.46□□□□□ -0.25
CLK3-206ENST00000562078 RFC1P35251 1148 aaPredicted RBP13.46□□□□□ -0.25
CLK3-206ENST00000562078 OPRL1P41146 370 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 DPP6P42658 865 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 BEX3Q00994 111 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 SLC10A2Q12908 348 aaPredicted RBP13.46□□□□□ -0.25
CLK3-206ENST00000562078 KIZQ2M2Z5 673 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 PTPN20Q4JDL3 420 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 KCNT2Q6UVM3 1135 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 PCGF5Q86SE9 256 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 FAM20CQ8IXL6 584 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 ADAMTS16Q8TE57 1224 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 SLC4A5Q9BY07 1137 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 ZNF518BQ9C0D4 1074 aa13.46□□□□□ -0.25
CLK3-206ENST00000562078 FAM49AQ9H0Q0 323 aaPredicted RBP13.46□□□□□ -0.25
CLK3-206ENST00000562078 TRPV6Q9H1D0 765 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms