RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 APLP1P51693 650 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 ABCE1P61221 599 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 MAXP61244 160 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 MPP1Q00013 466 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 ITKQ08881 620 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 ITGA9Q13797 1035 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 USP10Q14694 798 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 SLC8B1Q6J4K2 584 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 LONP2Q86WA8 852 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 DENND6AQ8IWF6 608 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 TNS4Q8IZW8 715 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SLC25A41Q8N5S1 370 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 PPP4R1Q8TF05 950 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 RANBP9Q96S59 729 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SORT1Q99523 831 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 NMRAL1Q9HBL8 299 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 MTRRQ9UBK8 725 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 TLK1Q9UKI8 766 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 TRIM17Q9Y577 477 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 HEATR9A2RTY3 570 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 G3V2L1 256 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 CCDC22O60826 627 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 WFS1O76024 890 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 EFEMP2O95967 443 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 APOA4P06727 396 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SLC8A1P32418 973 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 HARS2P49590 506 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 VEGFBP49765 207 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SERPINH1P50454 418 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 CCL23P55773 120 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 YBEYP58557 167 aaPredicted RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 DSC2Q02487 901 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SERINC3Q13530 473 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 THOC5Q13769 683 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 CNGA3Q16281 694 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 RAPH1Q70E73 1250 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 SLC41A1Q8IVJ1 513 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 MYEOVQ96EZ4 313 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 CEP295NLQ96MC4 621 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 CDK5RAP1Q96SZ6 601 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 C1QTNF1Q9BXJ1 281 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 HIPK3Q9H422 1215 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 STN1Q9H668 368 aaKnown RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 PAK6Q9NQU5 681 aaPredicted RBP9.93□□□□□ -0.82
SMG1-205ENST00000561947 ARMCX1Q9P291 453 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 MID2Q9UJV3 735 aa9.93□□□□□ -0.82
SMG1-205ENST00000561947 OR1E1P30953 314 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 ARRB2P32121 409 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 SLC1A2P43004 574 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 KCNQ1P51787 676 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 CTBP1Q13363 440 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 USP41Q3LFD5 358 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 C5orf22Q49AR2 442 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 ATG14Q6ZNE5 492 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 LCA5Q86VQ0 697 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 PGBD5Q8N414 524 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 C2CD4AQ8NCU7 369 aaPredicted RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 TADA1Q96BN2 335 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 TSNARE1Q96NA8 513 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 DEFB118Q96PH6 123 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 MIPEPQ99797 713 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 EBF4Q9BQW3 602 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 BTBD10Q9BSF8 475 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 BACE2Q9Y5Z0 518 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 FAM95CA0A1B0GW59 222 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 CAPN14A8MX76 684 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 TMEM114B3SHH9 223 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 F5H5T6 163 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 PHGDHO43175 533 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 H2AFYO75367 372 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 PARNO95453 639 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 SERPINA6P08185 405 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 SLC35E2BP0CK96 405 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 ESRRAP11474 423 aaPredicted RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 COL6A2P12110 1019 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 RPL17P18621 184 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 SAT1P21673 171 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 DNAJB1P25685 340 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 ATP5C1P36542 298 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 ACVRL1P37023 503 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 TUFMP49411 452 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 MSLNQ13421 630 aaPredicted RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 SLC12A1Q13621 1099 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 IHHQ14623 411 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 LBRQ14739 615 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 TSTD2Q5T7W7 516 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 SNX30Q5VWJ9 437 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 RNF168Q8IYW5 571 aaPredicted RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 LGI2Q8N0V4 545 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 ARRDC2Q8TBH0 407 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 RDH11Q8TC12 318 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 SREK1Q8WXA9 508 aaKnown RBP9.92□□□□□ -0.82
SMG1-205ENST00000561947 RILPQ96NA2 401 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 PPP1R12CQ9BZL4 782 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 FAM96AQ9H5X1 160 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 TASP1Q9H6P5 420 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 PNPOQ9NVS9 261 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
SMG1-205ENST00000561947 PCDHB12Q9Y5F1 795 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms