RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TBC1D3Q8IZP1 549 aaPredicted RBP20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 ACRBPQ8NEB7 543 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 PCDH19Q8TAB3 1148 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 RAPGEF5Q92565 580 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 FAM131CQ96AQ9 280 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 RMDN1Q96DB5 314 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 GOLPH3Q9H4A6 298 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 REXO2Q9Y3B8 237 aaKnown RBP20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 SLCO1B1Q9Y6L6 691 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 CEP250Q9BV73 2442 aa20.23■□□□□ 0.83
TSPAN3-210ENST00000561277 DNAH14Q0VDD8 3507 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 LRRD1A4D1F6 860 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 PLRG1O43660 514 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 MFSD11O43934 449 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 BUB1BO60566 1050 aaPredicted RBP20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 PALMO75781 387 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 SERPINF2P08697 491 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 COMTP21964 271 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 SLC1A1P43005 524 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 PPP2CBP62714 309 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 PPP2CAP67775 309 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 IL10RBQ08334 325 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 MYLK3Q32MK0 819 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 ANKRD20A8PQ5CZ79 823 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 ERN2Q76MJ5 926 aaKnown RBP20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 TMEM139Q8IV31 216 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 NETO1Q8TDF5 533 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 SLC6A14Q9UN76 642 aa20.22■□□□□ 0.83
TSPAN3-210ENST00000561277 A0A1B0GTW7 788 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 RCCD1A6NED2 376 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 BCAT2O15382 392 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 POP4O95707 220 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 KRT1P04264 644 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 UGT2B4P06133 528 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 ENGP17813 658 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 KDELR1P24390 212 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 MAPK8P45983 427 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 HADHBP55084 474 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 NCBP2-AS2Q69YL0 99 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 PARS2Q7L3T8 475 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 ATPAF2Q8N5M1 289 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 CINPQ9BW66 212 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 GTPBP2Q9BX10 602 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 PI4KAP42356 2102 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 A0A0A6YYK5 440 aaPredicted RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 MAP3K6O95382 1288 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 ITGB7P26010 798 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 CD27P26842 260 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 NEK3P51956 506 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 TAS2R38P59533 333 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 RAD51Q06609 339 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 ODF2Q5BJF6 829 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 FBXL19Q6PCT2 694 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 RHOT1Q8IXI2 618 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 TSEN2Q8NCE0 465 aaKnown RBP20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 HDAC8Q9BY41 377 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 CAPN10Q9HC96 672 aa20.21■□□□□ 0.83
TSPAN3-210ENST00000561277 SPTBN4Q9H254 2564 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 INSIG1O15503 277 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 MAT2AP31153 395 aaKnown RBP20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 ID4P47928 161 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 CCDC15Q0P6D6 951 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 TMCO4Q5TGY1 634 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 STPG1Q5TH74 334 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 FAF2Q96CS3 445 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 LRIG1Q96JA1 1093 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 KLHL32Q96NJ5 620 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 DESI2Q9BSY9 194 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 KDM4CQ9H3R0 1056 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 EBF2Q9HAK2 575 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 TM9SF3Q9HD45 589 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 SALL4Q9UJQ4 1053 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 ALG6Q9Y672 507 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 DUSP10Q9Y6W6 482 aa20.2■□□□□ 0.82
TSPAN3-210ENST00000561277 A0A1W2PPC4 97 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 MAFKO60675 156 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 PIGNO95427 931 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 ADRB3P13945 408 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 RGRP47804 291 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 CCR5P51681 352 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 ATXN3P54252 364 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 NAP1L1P55209 391 aaKnown RBP20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 RFTN1Q14699 578 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 LBRQ14739 615 aaKnown RBP20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 ZNF805Q5CZA5 627 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 LRRC38Q5VT99 294 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 LAYNQ6UX15 382 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 GDPD4Q6W3E5 623 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 KIAA1328Q86T90 577 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 PQLC3Q8N755 202 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 C1orf216Q8TAB5 229 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 VOPP1Q96AW1 172 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 RNF25Q96BH1 459 aaPredicted RBP20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 ORAI3Q9BRQ5 295 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 OSBPL1AQ9BXW6 950 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 PREBQ9HCU5 417 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 TMEM9BQ9NQ34 198 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 ADAMTS9Q9P2N4 1935 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 PLXNA2O75051 1894 aa20.19■□□□□ 0.82
TSPAN3-210ENST00000561277 C16orf96A6NNT2 1141 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms