RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 RHOAP61586 193 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 IFI35P80217 286 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 RAD51Q06609 339 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 KLF1Q13351 362 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 PRKD1Q15139 912 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 RPS6KA1Q15418 735 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 TTC31Q49AM3 519 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 ARSIQ5FYB1 569 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 MARC1Q5VT66 337 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 KIAA1324Q6UXG2 1013 aaKnown RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 NPNTQ6UXI9 565 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 BBS5Q8N3I7 341 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 CHST14Q8NCH0 376 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 CADM4Q8NFZ8 388 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 NSMCE1Q8WV22 266 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 LOXL4Q96JB6 756 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 SPACA7Q96KW9 195 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 TUBGCP5Q96RT8 1024 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 IL12RB2Q99665 862 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 MGME1Q9BQP7 344 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 TM6SF2Q9BZW4 377 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 DUSP15Q9H1R2 295 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 KDM4CQ9H3R0 1056 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 SGK2Q9HBY8 427 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 MBD1Q9UIS9 605 aaPredicted RBP9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 PYCARDQ9ULZ3 195 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 NCKAP1Q9Y2A7 1128 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 JRKLQ9Y4A0 524 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 HEY1Q9Y5J3 304 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 ADAMTS9Q9P2N4 1935 aa9.77□□□□□ -0.85
RABGGTA-221ENST00000561055 TSPAN11A1L157 253 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 HACD1B0YJ81 288 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 RNF103O00237 685 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 MUSKO15146 869 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 MTSS1O43312 755 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 LEFTY1O75610 366 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 CCNB1P14635 433 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 PECAM1P16284 738 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 CES1P23141 567 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 ITGB7P26010 798 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 MMP13P45452 471 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 MAPK8P45983 427 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 RGRP47804 291 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 AP1S1P61966 158 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 CCDC15Q0P6D6 951 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 SRSF5Q13243 272 aaKnown RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 SIM2Q14190 667 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 NOMO1Q15155 1222 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 PLK5Q496M5 336 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 ATXN7L2Q5T6C5 722 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 KAZNQ674X7 775 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 PMS2CLQ68D20 193 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 AADACL2Q6P093 401 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 SRLQ86TD4 932 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 PGBD5Q8N414 524 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 AADATQ8N5Z0 425 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 FRMD1Q8N878 549 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 TTC13Q8NBP0 860 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 RLN3Q8WXF3 142 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF419Q96HQ0 510 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF641Q96N77 438 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 NUDCD1Q96RS6 583 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 LGMNQ99538 433 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 CINPQ9BW66 212 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 CD93Q9NPY3 652 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 HAUS2Q9NVX0 235 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 FBXL12Q9NXK8 326 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 SAE1Q9UBE0 346 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 DKK3Q9UBP4 350 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 EVLQ9UI08 416 aaPredicted RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 TPX2Q9ULW0 747 aaKnown RBP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 ATP8A1Q9Y2Q0 1164 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 R4GN57 208 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 USP34Q70CQ2 3546 aa9.76□□□□□ -0.85
RABGGTA-221ENST00000561055 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 A0A1W2PP55 124 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 A0A1W2PQ67 120 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 USP27XA6NNY8 438 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 KRIT1O00522 736 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 INSIG1O15503 277 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 AP1G1O43747 822 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 BNIP3LO60238 219 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF189O75820 626 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 RHOBTB1O94844 696 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 MAP3K6O95382 1288 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 BCKDHBP21953 392 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 MSNP26038 577 aaKnown RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ACSL1P33121 698 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 PSMD8P48556 350 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 DNA2P51530 1060 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 SUOXP51687 545 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 METAP1P53582 386 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 DYNLT1P63172 113 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 CNTN1Q12860 1018 aa9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF211Q13398 564 aaPredicted RBP9.75□□□□□ -0.85
RABGGTA-221ENST00000561055 ZNF235Q14590 738 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms