RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 A0A1B0GVT2 93 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 ARHGAP42A6NI28 874 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 J3KR12 359 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 RNGTTO60942 597 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 MTA2O94776 668 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PROSCO94903 275 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 CER1O95813 267 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TPM1P09493 284 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 CSNK1DP48730 415 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PAPOLAP51003 745 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TSR1Q2NL82 804 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 HLA-BQ31612 363 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TMEM259Q4ZIN3 620 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PPP6R3Q5H9R7 873 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PRPF39Q86UA1 669 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 IQCHQ86VS3 1027 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 NPWQ8N729 165 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TC2NQ8N9U0 490 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 MFSD2AQ8NA29 543 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 HCAR2Q8TDS4 363 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 SNX19Q92543 992 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 RAB7BQ96AH8 199 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PPP1R16AQ96I34 528 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 GTPBP2Q9BX10 602 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 OSBPL1AQ9BXW6 950 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 TM6SF2Q9BZW4 377 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 GAREM1Q9H706 876 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 ZWILCHQ9H900 591 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 PCDH18Q9HCL0 1135 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 RCOR3Q9P2K3 495 aaPredicted RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 LHX3Q9UBR4 397 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 INTUQ9ULD6 942 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 ZFR2Q9UPR6 939 aaKnown RBP13.42□□□□□ -0.26
SMAD3-213ENST00000560175 FADS3Q9Y5Q0 445 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 SNX11Q9Y5W9 270 aa13.42□□□□□ -0.26
SMAD3-213ENST00000560175 ARID1BQ8NFD5 2236 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 C16orf96A6NNT2 1141 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 AKR1B15C9JRZ8 316 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 H3BRJ5 948 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 DFNA5O60443 496 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 CBFA2T3O75081 653 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 LCA5LO95447 670 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ADRB3P13945 408 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 CD38P28907 300 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 MAN1A1P33908 653 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 NEK3P51956 506 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 IL10RBQ08334 325 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 NSUN2Q08J23 767 aaKnown RBP eCLIP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 OVGP1Q12889 678 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 HNRNPDQ14103 355 aaKnown RBP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ZNF284Q2VY69 593 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 UAP1L1Q3KQV9 507 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 POM121L1PQ3SYA9 428 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 N4BP2L1Q5TBK1 243 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 NAPEPLDQ6IQ20 393 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 LEKR1Q6ZMV7 388 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ZSCAN30Q86W11 494 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 HORMAD1Q86X24 394 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 TMEM145Q8NBT3 493 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 GRIN3AQ8TCU5 1115 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ASB12Q8WXK4 309 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 CTNNBL1Q8WYA6 563 aaPredicted RBP13.41□□□□□ -0.26
SMAD3-213ENST00000560175 MRFAP1L1Q96HT8 127 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 GDAP1L1Q96MZ0 367 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 SLC6A18Q96N87 628 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 CSPG4P5Q96PW8 444 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 TRIM5Q9C035 493 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ERVMER34-1Q9H9K5 563 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 IL21RQ9HBE5 538 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 DYRK4Q9NR20 520 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ETNK2Q9NVF9 386 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 ANKRD36A6QL64 1941 aa13.41□□□□□ -0.26
SMAD3-213ENST00000560175 TSPAN11A1L157 253 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 PRAMEF26H0Y7S4 382 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 GIPC1O14908 333 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 AREL1O15033 823 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SPINT1O43278 529 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 DAPK3O43293 454 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 AKR1B10O60218 316 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 PCDHGA12O60330 932 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 PEX11BO96011 259 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 FECHP22830 423 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 AMPD1P23109 780 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 PMLP29590 882 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 GKP32189 559 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 ARL4AP40617 200 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 ARHGAP25P42331 645 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 DNA2P51530 1060 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 RAD51Q06609 339 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 RFTN1Q14699 578 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 GRM3Q14832 879 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 HADHQ16836 314 aaKnown RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SMTNL2Q2TAL5 461 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SETMARQ53H47 684 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 ATXN7L2Q5T6C5 722 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 PSAPL1Q6NUJ1 521 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms