RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 USP34Q70CQ2 3546 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ZC3H18Q86VM9 953 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TMPRSS6Q8IU80 811 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CCDC13Q8IYE1 715 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 KMT2EQ8IZD2 1858 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ATPAF2Q8N5M1 289 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 FRMD1Q8N878 549 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TSTD1Q8NFU3 115 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 OR2AP1Q8NGE2 309 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 OR6K2Q8NGY2 324 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ARRDC2Q8TBH0 407 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ATG4AQ8WYN0 398 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 P3H4Q92791 437 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 EXOC2Q96KP1 924 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 OSBPL9Q96SU4 736 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 GORASP1Q9BQQ3 440 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 REPIN1Q9BWE0 567 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 SP110Q9HB58 689 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 USP36Q9P275 1121 aaKnown RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 SERGEFQ9UGK8 458 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 TTC7AQ9ULT0 858 aaPredicted RBP9.18□□□□□ -0.94
HMG20A-209ENST00000559728 HPCAL4Q9UM19 191 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 SLC8A2Q9UPR5 921 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 ATP8A1Q9Y2Q0 1164 aa9.18□□□□□ -0.94
HMG20A-209ENST00000559728 CCDC163A0A0D9SF12 145 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ALOX15BO15296 676 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 LAMTOR5O43504 91 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 SYNCRIPO60506 623 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 LILRB5O75023 590 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 JCHAINP01591 159 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 IGLV3-19P01714 112 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 FGGP02679 453 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 HLA-DQB2P05538 268 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 PRLRP16471 622 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 PTPN3P26045 913 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 RBL1P28749 1068 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 CHRNA3P32297 505 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 CSNK1DP48730 415 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 FNTBP49356 437 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 GEMIN4P57678 1058 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 MAXP61244 160 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 NSUN2Q08J23 767 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 SRSF5Q13243 272 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 XRCC4Q13426 336 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 E2F5Q15329 346 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 OASLQ15646 514 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 MYLK3Q32MK0 819 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF528Q3MIS6 628 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ACCSLQ4AC99 568 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ODF2Q5BJF6 829 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 SLC45A4Q5BKX6 768 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 SDE2Q6IQ49 451 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ADAT2Q7Z6V5 191 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 WDR5BQ86VZ2 330 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ZSWIM9Q86XI8 627 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ZNF354CQ86Y25 554 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 CREG2Q8IUH2 290 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 AADATQ8N5Z0 425 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 PRELID2Q8N945 189 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ZBTB44Q8NCP5 570 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 HMGB4Q8WW32 186 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 NKD2Q969F2 451 aaPredicted RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ARRDC3Q96B67 414 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 TADA1Q96BN2 335 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 CEP41Q9BYV8 373 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 TPSD1Q9BZJ3 242 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 POLMQ9NP87 494 aaPredicted RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 ITM2CQ9NQX7 267 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 RBM22Q9NW64 420 aaKnown RBP eCLIP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 HECAQ9UBI9 543 aaPredicted RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 SEPT3Q9UH03 358 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 EVLQ9UI08 416 aaPredicted RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 DNPEPQ9ULA0 475 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 MYO15AQ9UKN7 3530 aa9.17□□□□□ -0.94
HMG20A-209ENST00000559728 NYNRINQ9P2P1 1898 aaKnown RBP9.17□□□□□ -0.94
HMG20A-209ENST00000559728 IGHV1OR15-9A0A0B4J2B8 117 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 BCLAF3A2AJT9 711 aaKnown RBP9.16□□□□□ -0.94
HMG20A-209ENST00000559728 HACD1B0YJ81 288 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
HMG20A-209ENST00000559728 PLK4O00444 970 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 CES2O00748 559 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 TRAFD1O14545 582 aaPredicted RBP9.16□□□□□ -0.94
HMG20A-209ENST00000559728 PPP1R12AO14974 1030 aaPredicted RBP9.16□□□□□ -0.94
HMG20A-209ENST00000559728 MID1O15344 667 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 SPINT1O43278 529 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 LIASO43766 372 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 CEP104O60308 925 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 LEFTY1O75610 366 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 RBP3P10745 1247 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 CCNB1P14635 433 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 NNMTP40261 264 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 P2RY2P41231 377 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 MMP13P45452 471 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 GDF10P55107 478 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 TAS2R38P59533 333 aa9.16□□□□□ -0.94
HMG20A-209ENST00000559728 EIF3EP60228 445 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms